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Application of Mass Spectrometry for the Determination of Oxidative Stress Markers and Mycotoxins
Čumová, Martina ; Večeřa, Zbyněk (referee) ; Hajšlová, Jana (referee) ; Vávrová, Milada (referee) ; Čáslavský, Josef (advisor)
The first topic presented in the dissertation thesis is determination of isoprostanes as markers of oxidative stress and other compounds affected by presence of oxidative stress. Isoprostanes iPF2-III, iPF2-VI, iPF2-VI, astaxanthin and polyunsaturated fatty acids (PUFA), especially arachidonic acid (AA) were monitored in Atlantic salmon eggs (Salmo salar). Methods for the determination of these compounds have been developed and optimized using chromatographic separation coupled to conventional or mass spectrometric detection. Freshly laid eggs, eyed embryos and non-viable eggs were used to test a general hypothesis that egg viability can be affected by susceptibility to oxidative stress, either through the specific fatty acid concentration and/or the antioxidant capacity of the eggs. Levels of isoprostanes and arachidonic acid (AA) were significantly higher in non-viable eggs than in control (eyed embryos) as well as relative abundance of PUFA. While no difference of isoprostanes was found between freshly laid and control those from the Atlantic stock except iPF2-VI which was observed under the LOQ in the control. Higher levels of PUFA and AA in comparison with the control were observed in the freshly laid eggs. However, the only statistically significant difference was observed in the amount of astaxanthin. Different levels of PUFA and astaxanthin may be related to their biochemical consumption during the development of eggs. This work evaluated potential effect on the viability of eggs Salmo salar due to the presence of oxidative stress. The monitoring of mycotoxins in food and feed was the subject of the second topic. Mycotoxins are secondary metabolites produced by fungi. They are ubiquitous undesirable natural contaminants that are toxic for humans and animals. Today are known more than 500 mycotoxins. However, only few of them are regulated by the European Union. The European Food Safety Authority (EFSA) was asked by the European Commission to provide a scientific opinion on other mycotoxins for which statutory limits could be developed. In this study is proposed simultaneous screening allowing fast, reliable and sensitive approach, identification and quantification of 17 mycotoxins in food and feed sample. The method includes both mycotoxins regulated by the EU and selected mycotoxins required by the EFSA (aflatoxins, deoxynivalenol, nivalenol, zearalenone, fumonisin, ochratoxin A, T-2 toxin, HT-2 toxin, enniatins and beauvericin). Analytes are isolated by the modified QuEChERS method. For separation and target mycotoxins detection, ultra-performance liquid chromatography coupled to tandem mass spectrometry (UPLC –MS/MS) was employed. The method also allows determination of ergot alkaloids (ergocornine, ergosine, ergocryptine, ergocristine and their respective epimers). The developed method was used either for monitoring mycotoxins and ergot alkaloids in feed and raw materials and barley and malt prepared from it.
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Miniaturized techniques for analysis of industrial yeasts
Obalil, Jiří ; Kočí, Radka (referee) ; Klepárník,, Karel (advisor)
Carotenoids are natural pigments that have antioxidation and antimutagenic abilities. They are produced with the help of new technological methods. For example, carotenoid yeast Rhodotorula glutinis produces -carotene with the yield of up to 6 – 10 mg/g of the dry substance. The method of the mass spectrometry with the nanoelectrospray in the positive mode was optimized for the determination of -carotene, lycopene and astaxanthin in this project. Ionizing voltage of 4 kV and the sample flow rate of 15 – 80 nl/min through the spray silica fused capillary with the internal diameter of 25 µm were found to be the optimum parameters of the analysis. A mixture of chloroform with the addition of ammonia was used as a spray solvent for both standard and cellular samples. During the process of ionization by nanoelectrospray, -carotene and lycopene form cation radical [M] • + with the molecular mass to charge ratio (m/z) of 536, while asthaxanthin forms the protonated molecule [M + H]+ with the m/z of 597. The partial lysis of individual Rhodotorula glutinis cells was demonstrated under microscope in the organic solvents tetrahydrofuran and dimethylsulfoxide. Chloroform, acetone, acetonitrille, methanol and isopropanol did not affect the cells after a 15 min treatment.
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OPtimization od cultivation od microalgae cultures in photobioreactors
Byrtusová, Dana ; Márová, Ivana (referee) ; Kočí, Radka (advisor)
Presented diploma thesis is focused on the optimisation of Haematococcus pluvialis cultivations in different photobioreactors and on biotechnological production of astaxanthin. Theoretical part summarized the knowledge about optimal growth and production conditions of secondary metabolites. Followed research was focused on actual cultivation systems and on the possibilities of metabolite and nutrient monitoring. In experimental part the growth characteristic of the strain from Březova nad Svitavou (HMP-CCALA 375) was analyzed under optimal cultivation conditions on white and red light. During culture growth the profile and the concentration of carotenoid pigments were determined. The best yield of biomass was achieved in the cultivation on white light (0,939 g/l),carotenoids lutein and -carotene were observed as dominant pigments. In the next experiments optimal growth medium, temperature and light intensity were determined for cultivations of four chosen HMP strains from Germany, America, Africa and Switzerland. The most suitable cultivation medium was found BBM, oppositely the worst results were obtained with BG11. In previous experiments cultivation temperature 22 °C was determined as optimal value for comparative strain HMP – CCALA 375. Selected four strains were cultivated at 22 °C, as well as at 25 °C. Higher temperature was more optimal mainly for Switzerland, German and Africa strains. By analyzing of light intensity influence, it was found that the best increase of biomass was induced by the adaptation of culture on lower illumination (50 µmol photones•m^-2•s^-1) followed by higher light intensity (100 - 150 µmol photones•m^-2•s^-1). HMP from Switzerland showed the best growth results during all cultivation experiments, so this strain could be perhaps useful for industrial production of astaxanthin. In the last part of work, the influence of stress conditions on astaxanthin production by strain from Březova nad Svitavou (HMP – CCALA 375) was studied. Followed stress factors were used: high intensity of light (1 000 µmol photones•m^-2•s^-1), low nitrogen concentration (32,96 mg/l), addition of sodium chloride (0,5%), influence of sodium acetate (2,2 mM) and combination of sodium chloride and sodium acetate (0,5% NaCl, 2mM NaAc). Due to strong illumination (1 000 µmol photones•m^-2•s^-1) the best yield of astaxanthin was obtained (more than 20 mg/g). According to literature [103, 105] significant amount was also observed by addition of sodium acetate (9,2 mg/g). Oppositely minimal astaxanthin production was showed in presence of salt stress (3,8 mg/g). In followed experiments should be studied the influence of stress combinations on HMP – CCALA 375 strain as well as on other suitable strains of H. pluvialis with the aim to achieve the maximal yield of astaxanthin significant for large scale cultivation.
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Metabolite production by some strains of industrial yeasts in various phases of cell growth
Jankeje, Kristína ; Kubešová,, Jitka (referee) ; Kočí, Radka (advisor)
Presented bachelor thesis is focused on industrial application of chosen yeast strains. Principal interest of work is to study production of primary and secondary metabolites during individual growth phases. Optimal growth conditions as well as influence of exogenous stress factors (mainly oxidative and/or salt stress) on cell growth and yeast metabolism are discussed. In experimental part growth curve of industrial strain Phaffia rhodozyma was determined. Biomass increase (maximum in 90th hour 5,441 g/l), astaxanthin production (secondary metabolite) and/or ergosterol biosynthesis (primary metabolite) were observed. The best ration of astaxanthin to total carotenoids was 50 %. Next studied metabolite was ergosterol, its total amount in dry biomass was 0.11 %. In conclusion astaxanthin amounts produced in optimal growth conditions were compared with yields obtained under stress cultivations. Results of stress experiments illustrate positive influence of stress factors on cell growth as well as on astaxanthin biosynthesis. Low concentration of salt (2% NaCl) added in inoculum with 5 mM hydrogen peroxide in production medium would be the best combination in industrial applications.
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Optimalization of the extraction of bioactive compounds from herbs into different kind of oil bases
Chytil, Dalibor ; Zemanová, Jana (referee) ; Pořízka, Jaromír (advisor)
This diploma thesis deals with the optimization of processes for extraction of bioactive lipophilic compounds from fruits of sea buckthorn (Hippophae Rhamnoides) into various types of plant oil bases using simple maceration. The theoretical part of this thesis deals with the characterization of this herb, its botanical classification, traditional use, chemical composition and medicinal effects. Increased attention is also paid to the characterization of individual types of plant oils used, namely camellia, camellia organic, passionflower, kukui and kiwi oil. The experimental part of the thesis deals with application of theoretical knowledge. The profile of total and free fatty acids for individual plant oil bases was determined by GC/FID, furthet the basic fat numbers were also determined. When optimizing the extraction, emphasis was placed not only on the effect of the extraction agent used, but also on the extraction time (1, 3, 5, 7, 10, 14, 21 and 66 days). The macerates were continuously subjected to the determination of selected parameters (total amount of carotenoids, total amount of phytosterols, lutein, neoxanthin, astaxanthin, stigmasterol, -sitosterol and vitamin E) using UV-VIS spectroscopy and HPLC/PDA. Likewise, the peroxide number was monitored during maceration to assess the degree of oxidative degradation of macerates. The recovery of selected total parameters in individual oils did not differ significantly in most cases. On the contrary, the yield of individual monitored parameters differed significantly. At the same time, static maceration under our conditions was not very suitable for the extraction of vitamin E, stigmasterol and total phytosterols.
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Euglenids (Excavata: Euglenophyta): Important Species
Bryxová, Tereza ; Říhová, Dagmar (advisor) ; Hanel, Lubomír (referee)
This bachelor thesis focuses on a detailed description of euglenids (Excavata: Euglenozoa), and selected important species from the class Euglenophyta. Euglenids are unicellular mostly free-living flagellates. Their most closely related protozoans are those from the group called Kinetoplastida. Members of Euglenophyta have specific and unique cell structure. A specific organelle, the stigma (also called eye spot), formed by a large number of pigment granules, helps them to perceive the direction from which light comes. An important part of the cell are also plastids, which cause different colouration of euglenids, and thus also colour of freshwater bodies in which they occur. Mobile stages of euglenids possess two flagella (sometimes only one flagellum is present - e.g. genus Euglena) which are anchored in small cavity called ampula. The surface of the flagellum is covered with fine hairs, mastigonemes. The thesis closely focuses on three euglenid species. Euglena viridis is characterized by its green colour and forms characteristic green clusters visible on the water surface of water bodies. Euglena gracilis is of great importance as a potential source in biotechnological use. It is one of the future sources of biofuels or healthy bioproducts. The last closely described model representative is...
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Diversity, ecology and ecophysiology of snow algae
Mikešová, Lenka ; Nedbalová, Linda (advisor) ; Kvíderová, Jana (referee)
Permanent and temporary snow cover in polar and mountain areas is a very extreme habitat. However, there are organisms that inhabit this environment. Green algae of the order Chlamydomonadales (Chlorophyta) belong among the important representatives of cryoseston, which are known from polar and mountain regions around the world. These organisms, which occupied the snow environment probably secondarily, developed different ecophysiological adaptations required for the successful survival in extreme conditions. Low temperatures and high levels of radiation are the main extreme factors that organisms must cope with. The most important survival mechanisms include the adaptation of life cycles (such as of the shifts between resistant stages and moving vegetative stages), accumulation of secondary carotenoids, changes in fatty acid composition of membranes and lowering of growth temperature optima in some species. These adaptations together with the study of diversity represent at present the main subjects of research of snow algae.
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Development of HPLC separation of astaxanthin, β-carotene and lutein
Hrubcová, Kateřina ; Nováková, Eliška (advisor) ; Kozlík, Petr (referee)
This bachelor's thesis deals with the development of a method for the separation of carotenoid pigments, especially astaxanthin, β-carotene and lutein, produced by the microscopic green alga Tetracystis pulchra. The work compares published methods for the separation of carotenoid pigments and attempts to optimize a method suitable for the analysis of pigment extracts from Tetracystis pulchra cells. Optimized conditions for HPLC-DAD separation of carotenoid pigments were as follows: mobile phase A - ACN/MeOH/0,05M Tris-HCl buffer (pH = 8,0): 94/2/4, mobile phase B - MeOH/EtOAc: 68/32 under gradient elution, flow rate 0,25 ml min˗1 , column temperature 28 řC. The column used was Kinetex C18 (100 × 2,1 mm, 2,6 µm), injection volume was 20 µl and UV detection was performed at 470 nm. Total analysis time was 23 minutes. Key words: HPLC, astaxanthin, β-carotene, lutein
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Effect of stress factors on carotenoid production in isolated soil algae strains
Očadlíková, Terezie ; Němcová, Yvonne (advisor) ; Nedbalová, Linda (referee)
Microscopic green algae produce a number of beneficial substances. The commercially used ones include mainly pigments, especially secondary carotenoids. While primary carotenoids are part of the photosynthetic apparatus, secondary carotenoids are produced only under certain specific conditions (e.g. high exposure to light, nitrogen deficiency). Secondary carotenoids have antioxidant properties that protect the cell from adverse effects. The strains currently in commercial use and the strains that are tested for potential use come almost exclusively from algal collections, so this thesis focuses on strains isolated from nature. Two strains of aeroterrestrial green unicellular algae, which showed potential of producing carotenoids, were found and isolated. These strains were identified as Tetracystis pulchra (clade Dunaliellinia) and Tetracystis sp., a strain related to Tetracystis tetraspora SAG 98.80, belonging to the clade Stephanosphaerinia. The culture conditions for T. pulchra were subsequently optimized and then the culture was subjected to a series of experiments, examining the effect of stress factors on carotenoid formation and accumulation. Specifically, the effect of nitrogen starvation, light intensity, temperature and UVA radiation was tested. It has been shown that especially the light...
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Optimalization of the extraction of bioactive compounds from herbs into different kind of oil bases
Chytil, Dalibor ; Zemanová, Jana (referee) ; Pořízka, Jaromír (advisor)
This diploma thesis deals with the optimization of processes for extraction of bioactive lipophilic compounds from fruits of sea buckthorn (Hippophae Rhamnoides) into various types of plant oil bases using simple maceration. The theoretical part of this thesis deals with the characterization of this herb, its botanical classification, traditional use, chemical composition and medicinal effects. Increased attention is also paid to the characterization of individual types of plant oils used, namely camellia, camellia organic, passionflower, kukui and kiwi oil. The experimental part of the thesis deals with application of theoretical knowledge. The profile of total and free fatty acids for individual plant oil bases was determined by GC/FID, furthet the basic fat numbers were also determined. When optimizing the extraction, emphasis was placed not only on the effect of the extraction agent used, but also on the extraction time (1, 3, 5, 7, 10, 14, 21 and 66 days). The macerates were continuously subjected to the determination of selected parameters (total amount of carotenoids, total amount of phytosterols, lutein, neoxanthin, astaxanthin, stigmasterol, -sitosterol and vitamin E) using UV-VIS spectroscopy and HPLC/PDA. Likewise, the peroxide number was monitored during maceration to assess the degree of oxidative degradation of macerates. The recovery of selected total parameters in individual oils did not differ significantly in most cases. On the contrary, the yield of individual monitored parameters differed significantly. At the same time, static maceration under our conditions was not very suitable for the extraction of vitamin E, stigmasterol and total phytosterols.
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