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Preparation of bioactive wound dressings and testing their interaction with human cells
Bendová, Agáta ; Márová, Ivana (referee) ; Skoumalová, Petra (advisor)
The thesis was focused on the preparation and optimization of the preparation of wound dressing from materials with bioactive ingredients. In this work were prepared nanofiber dressings based on polyhydroxybutyrate and non-fibrous dressings from alginate and chitosan. Nanofibers were prepared by electrospinning and forcespinning methods. The bioactive components, which were used to functionalize the prepared dressings, were plant extracts, clotrimazole, ampicillin, lysozyme, and proteolytic enzymes. The theoretical part is focused on the description of the use of nanofibrous and non-fibrous materials in medicine, characterization of materials for the production of wound dressings and bioactive components. Furthermore, this section describes the methods used to prepare and characterize wound dressings. In the practical part were prepared aqueous and oil extracts from selected plants. Extracts were characterized for polyphenols content and antioxidant activity. PHB-based nanofibers were prepared using electrospinning and forcepinning methods. Nanofibers were enriched with selected plant oil extracts and clotrimazol. Modified nanofibres were detemined for antioxidant activity, short-term and long-term stability. Non-fibrous wound dressings were prepared from alginate and chitosan. These dressings were functionalized by the addition of selected aqueous extracts, ampicillin, lysozyme, papain, bromelain, and collagenase. Non-fibrous wound dressings were determined for antioxidant activity, short-term stability and proteolytic activity. The prepared wound dressings were tested for their antimicrobial effects on cultures of Micrococcus luteus, Serratia marcescens, Staphylococcus epidermidis and Escherichia coli. In conclusion, successfully prepared bioactive wound dressings with antioxidant and antimicrobial agents were tested for safety on human cells. The determination was performed using the MTT cytotoxicity test on human keratinocytes.
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Preparation and characterization of modern wound covers
Balášová, Patricie ; Pernicová, Iva (referee) ; Skoumalová, Petra (advisor)
This diploma thesis is focused on the study of bioactive wound dressings. During the thesis, hydrogel, lyophilized and nanofiber wound dressings were prepared. Hydrogel and lyophilized wound dressings were prepared on basis of two polysaccharides – alginate and chitosan. Nanofiber wound dressings were prepared by spinning polyhydroxybutyrate. All prepared wound dressings were enriched with bioactive substances, which represented analgesics (ibuprofen), antibiotics (ampicillin) and enzymes (collagenase). Into hydrogel and lyophilized wound dressings were all the mentioned active substances incorporated, whereas nanofiber wound dressings were only with ibuprofen and ampicillin prepared. The theoretical part deals with the anatomy and function of human skin. There was explained the process of wound healing and also there were introduced available modern wound dressings. The next chapter of the theoretical part deals with materials for preparing wound dressings (alginate, chitosan, polyhydroxybutyrate) and with active substances, which were used during the experimental part of this thesis. In the theoretical part, the methods of preparation of nanofiber wound dressings and also the methods of cytotoxicity testing used in this work were presented. The first part of the experimental part of this thesis was focused on preparing already mentioned wound dressings. Then, their morphological changes over time and also the gradual release of incorporated active substances into the model environment were monitored. The gradual release of ampicillin was monitored not only spectrophotometrically, but also by ultra-high-performance chromatography. In wound dressings, in which collagenase was incorporated, was also the final proteolytic activity of this enzyme monitored. The effect of the active substances was observed on three selected microorganisms: Escherichia coli, Staphylococcus epidermidis and Candida glabrata. The cytotoxic effect of the active substances on the human keratinocyte cell line was monitored by MTT test and LDH test. A test for monitoring the rate of wound healing – a scratch test – was also performed.
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Use of optical and microfluidic techniques for analysis and separation of microbial cells
Večeríková, Paula ; Bernatová,, Silvie (referee) ; Samek,, Ota (advisor)
The presented diploma thesis primarily focuses on Raman spectroscopy and its connections to microfluidic techniques, along with potentially biotechnologically interesting products of bacterial strains Janthinobacterium lividum and Azotobacter vinelandii. The methods were chosen for their non-destructive nature, which allows for rapid cell analysis and comparison with gas chromatography. After analysis, cells can be further cultivated or a generation with excessive production of a selected metabolite can be prepared. Janthinobacterium lividum is a bacterial strain that produces the pigment violacein, which has significant biotechnological potential as a drug, antioxidant, fluorescent probe, or dye. The ability to distinguish between cells producing and not producing violacein can have wide applications in diagnosis and identification. In the experimental part, the spectra of three strains were measured, based on which Janthinobacterium lividum CCM 160 was selected for analysis using Raman tweezers, along with Cupriavidus necator H16. By evaluating with principal component analysis, the distinguishability of pigmented cultures from non-pigmented ones was determined, and a potential sorting marker of 1 140 cm-1 (corresponding to violacein) was selected for further measurements. The biotechnological potential of the Azotobacter vinelandii strain lies in its ability to fix nitrogen from the atmosphere, produce alginate, and polyhydroxybutyrate. The experimental part of the thesis focuses on identifying Raman spectra of five strains and the extracted alginates from them. Polyhydroxybutyrate (PHB) is a biodegradable polymer that replaces petrochemical plastics. For PHB production, Azotobacter vinelandii is an adept for commercial production, as it is one of the few that produces PHB directly from atmospheric nitrogen, which can lead to reduced production costs and thus higher representation of degradable plastics in the market. The highest response for PHB in Raman spectra was measured for Azotobacter vinelandii DSM 720 and the lowest for Azotobacter vinelandii DSM 85. Quantitative information for comparison was obtained from gas chromatography, which confirmed the measurements from Raman spectroscopy. By evaluating the measured Raman spectra of pure alginates, it is possible to assume that they are heteropolymeric fractions, as the spectra showed the expression of various monomers. Depending on the composition of subunits, the properties of alginate change, so it is necessary to know the composition for its adjustment for further use in medicine or the food industry. From the five Azotobacter vinelandii strains, producers with the highest and lowest PHB content were selected, which were subsequently analysed using Raman tweezers. By evaluating with principal component analysis, the distinguishability of these strains and their separability using the sorting parameter of 1 060 cm-1 was determined.
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Development and experimental evaluation of bioactivity of the next-generation bioinnoculants
Súkeník, Martin ; Pekař, Miloslav (referee) ; Sedláček, Petr (advisor)
This diploma thesis aimed to characterize specific mechanisms of biological activity in plant growth-promoting rhizobacteria (PGPR) commonly found in the rhizosphere of plants and to study the effects of liquid and gel application of PGPR bioinoculants on plants in a controlled environment. An original concept of self-encapsulation via cross-linking of alginate directly produced during their culturing was proposed for the preparation of gel bioinoculants based on these PGPRs. To validate the efficacy of this concept, all selected strains had to be subjected to gelation experiments with the crosslinking agent CaCl2 2 wt. % under alginate gel formation. Three specific strains of Azotobacter vinelandii DSM 87, DSM 720 and CCM 289 were selected for the preparation and characterization of the bioinoculants. The material properties of the formed gels were characterized by oscillatory rheometry (amplitude test). All strains were subjected to gravimetric determination of alginate and biomass concentrations. Flow cytometry with fluorescent probe PI, DAPI and SYTOX™ Green was used to verify cell viability immediately after culturing. Furthermore, the drying of gels was performed using a lyophilizer, where the lyophilized gel was used in swelling experiments followed by drying. To verify the biological activity of the bioinoculants, the ability of all strains to dissolve and utilize phosphate from the agar medium was qualitatively verified. Furthermore, the production of indole-3-acetic acid was spectrophotometrically verified for all strains. The production of siderophores was also verified qualitatively and quantitatively. Cultivation pilot experiments on the lettuce (Lactuca sativa) plant were performed with the addition of both liquid and gel carrier PGPR compositions; as a negative control, the plant was left without the addition of carrier PGPR composition. The results from the pilot growth experiment showed a positive growth effect of both gel and liquid PGPR composition on the plants. At the end of the growing experiment, higher leaf and root system lengths were recorded after the application of both forms of PGPR to the soil, specifically, the average leaf length with the addition of gel carrier PGPR composition was 4.3±1.0 cm and 4.3±1.2 cm for the gel carrier PGPR composition, and the average root system length was 18.3±5.2 cm and 17.4±6.0 cm, respectively. The dry weight per plant grown with the addition of liquid and gel PGPR was the same 0.19±0.07 g. The highest content of chlorophyll a, chlorophyll b and carotenoids in the leaves was spectrophotometrically detected in plants grown with the addition of liquid PGPR composition, specifically chlorophyll a was found to be 6±1 µg/ml, chlorophyll b 7±2 µg/ml and carotenoids 3.6±0.5 µg/ml. The diversity of soil microbiomes collected from the soil without the addition of PGPR composition, with the addition of liquid PGPR composition and with the addition of gel PGPR composition was analysed using BIOLOG EcoPlate™ plates. The diversity of the microbiome was evaluated using the average well colour development, i.e., the AWCD parameter, and the Shannon diversity index, H'. The highest utilization of the widest number of carbon sources on the plate was recorded for the soil microbiome with the addition of the gel PGPR composition. The aforementioned soil microbiome also showed the highest value of the H' index.
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Involvement of various gelation strategies in development of next-generation bioinnoculants
Krýslová, Jana ; Smilek, Jiří (referee) ; Sedláček, Petr (advisor)
This diploma thesis deals with the investigation cross-linking approaches of the bacterium Azotobacter vinelandii, which belongs to the PGPR group and is capable of producing alginate extracellularly. This crosslinking concept represents a novel approach to development of bioinoculants based on the PGPR. The first part is dedicated to investigating the effect of oxygen on the gelation of bacterial cultures itself. Experimentally, it was found that bacterial cultures in a total volume of 50 and 100 ml in 250 ml Erlenmeyer flasks showed spontaneous gelation already during the cultivation process, while the formed gels were measured rheometrically and showed values of const. complex modulus 0,026 kPa and 0,030 kPa. With a bacterial culture in a total volume of 150 ml, spontaneous cross-linking itself did not occur. In addition to gelation testing, the content of PHB and extracellular alginate and its molecular weight were determined in the bacterial cultures using size exclusion chromatography with multi-angle light scattering (SEC-MALS) and the mechanical properties of the resulting gels using rheometry. Cross-linking of bacterial cultures took place mainly with the use of CaCl2 as a cross-linking agent, but various alternative methods of gelation were tested as well (by means of polyvalent ions, weak organic acids, precipitants such as DMSO, emulsion gelation). The effect of glucono-D-lactone (GDL) as a gelling agent based on a slow release of crosslinking ions from their insoluble form was also tested. The strongest gels were formed by the addition of polyvalent ions (they ranged in the value of the complex modulus of 10 kPa, in the case of the use of weak acids and DMSO, the gels ranged in the value of the complex modules in the range of 1 to 10 kPa. The addition of GDL did not create gels immediately, but delayed, and gelation was observed in time.The formed gel ranged in value up to 1 kPa.
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Preparation, characterization layered hydrogel electrospun materials and determination of transport characteristics
Šudáková, Anna ; Kalina, Michal (referee) ; Smilek, Jiří (advisor)
V dnešní době je stále velký problém efektivního dodávání léčiv do lidského těla. Stále se jedná o příjem léčiva s konstantní koncentrací, která se uvolní v krátkém čase, což není velice efektivní. Proto došlo k zaměření se na vývoj nového způsobu dodávání léčiv pomocí tzv. postupného uvolňování, které by zamezilo rychlému uvolnění velké koncentrace léčiva do těla. Tento problém je zde řešen pomocí kompozitního materiálu složeného z netkané textilie, která zde funguje jako nosič hydrogelu, který v tomto případě prozatím nese barvivo pro stadium kinetiky uvolňování. Netkaná textilie z polypropylenu je zde zkoumána ve spojení s hydrogely alginátu, chitosanu a želatiny. Materiály byly studovány na to, jestli, a jak moc docházelo k uvolňování samotného hydrogelu z vrstevnatého materiálu pomocí uvolňování do prostředí vody. Toto bylo měřeno pomocí metody viskozimetrie. Následně byla zjišťována kinetika uvolňování skrz materiály s různým počtem vrstev pomocí metody difúzních cel. Poslední část práce se zaměřuje na studium uvolňování barviva (methylenové modři) z vrstevnatého materiálu, který obsahuje právě gradient tohoto barviva.
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Self-encapsulation of Plant Growth Promoting Rhizobacteria as a way towards new generation of bioinoculants
Gašparová, Dominika ; Obruča, Stanislav (referee) ; Sedláček, Petr (advisor)
This bachelor thesis focuses on Plant Growth-Promoting Rhizobacteria that can be used as a suitable ecological alternative to conventional fertilizers. However, most of today's approaches to incorporating PGPR into the process of soil fertilization are convoluted and costly. Crosslinking of alginate self-produced by PGPR offers a new possibility of plantgrowth- promoting bacteria encapsulation. The aim of this thesis consists of preparing gel matrices with incorporated bacteria, followed by testing the bacteria's viability and quantity. Firstly, experiments were carried out to determine various properties of gels produced by the chosen representative bacteria Azotobacter vinelandii. These properties include the molecular weight of alginate (with the highest molecular weight of strain CCM 289 (329,78± 6,8) kDa), the alginate's amount in the gel, the content of PHB (34%-44% CDW), and the gel's overall rheological properties. The complex modulus (as a representation of rheological properties) of the firmest gel reached the value of 13,34 kPa. The bacteria content was examined by flow cytometry, the CFU method, and spectrophotometry. The viability of bacteria was determined by analyzing the fluorescence intensity via fluorescent dyes (propidium iodide, fluorescein diacetate, rhodamine 123, calcein AM), then by using the CFU method, and also via the plate method. Furthermore, the effects of various factors such as different pH levels (pH 3, 7, and 10) or adding the specific alginatedegrading enzyme alginase were also examined. Releasing of the bacteria was observed over the course of seven days using flow cytometry and the CFU method. The plate method proved the bacteria's survival after gelation and without any source of carbon. The largest disintegration of gels occurred in acidic pH. Moreover, the effect of alginase on crosslinked bacterial gels and synthetic alginate were very similar. The survival of bacterial cultures in gel and their continuous release are significant findings in the development of novel bioinoculants based on this new concept.
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Preparation and characterization of enzyme-containing wound dressings
Jurová, Bronislava ; Szotkowski, Martin (referee) ; Skoumalová, Petra (advisor)
This diploma thesis is focused on the study and characterization of nanofiber wound dressings from natural biopolymers. Proteolytic enzymes, specifically collagenase and bromelain, were incorporated into these nanofiber covers. The theoretical part deals with a brief description of skin wounds, their healing and skin covers. There are also methods for preparing these covers and the methods used to characterize them. The practical part deals with the optimization of the preparation of nanofiber coatings based on polyhydroxybutyrate, gelatin, alginate and chitosan. These nanofibers were then enriched with active substances and their gradual release into the model environment was monitored. Finally, their proteolytic activity was determined for these substances.
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Encapsulation of active substances into nanofibers and possibilities of their application
Procházková, Lucie ; Pernicová, Iva (referee) ; Skoumalová, Petra (advisor)
The master thesis was based on the optimization of the production of nanofiber covers and to gaine the product for subsequent functional use. The production of nanofiber covers was made by electrospinning and forcespinning from selected materials. Polyhydroxybutyrate, gelatin, chitosan and alginate were used as starting materials. After successful optimization, these materials were enriched with active ingredients ampicillin and ibuprofen for the functionalized use of covers for more effective wound healing. The theoretical part was focused on the issue of skin, healing processes, types of wounds and nanofibers, the characterization of selected starting materials for the formation of nanofibers was also mentioned. The practical part was based on the lengthy optimization of the preparation of fiber covers and later enriched with active ingredients. Furthermore, combined covers made of different materials with contents of both active ingredients were designed. This was followed by the characterization of all prepared covers from the point of view of stability in the short and long term. The gradual release of active ingredients was determined spectrophotometrically and by hifh performance liquid chromatography. It was also important to determine the antimicrobial activity of selected active substances. At the end of all testing, combined coatings containing both active ingredients were used for safety testing with human keratinocyte cells (HaCaT). Safety testing was based on determining the viability of human cells using the MTT test, to verify the LDH test. A scratch test was also performed, a wound healing test after the application of devised combined covers.
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Preparation and characterization of modern wound covers
Balášová, Patricie ; Pernicová, Iva (referee) ; Skoumalová, Petra (advisor)
This diploma thesis is focused on the study of bioactive wound dressings. During the thesis, hydrogel, lyophilized and nanofiber wound dressings were prepared. Hydrogel and lyophilized wound dressings were prepared on basis of two polysaccharides – alginate and chitosan. Nanofiber wound dressings were prepared by spinning polyhydroxybutyrate. All prepared wound dressings were enriched with bioactive substances, which represented analgesics (ibuprofen), antibiotics (ampicillin) and enzymes (collagenase). Into hydrogel and lyophilized wound dressings were all the mentioned active substances incorporated, whereas nanofiber wound dressings were only with ibuprofen and ampicillin prepared. The theoretical part deals with the anatomy and function of human skin. There was explained the process of wound healing and also there were introduced available modern wound dressings. The next chapter of the theoretical part deals with materials for preparing wound dressings (alginate, chitosan, polyhydroxybutyrate) and with active substances, which were used during the experimental part of this thesis. In the theoretical part, the methods of preparation of nanofiber wound dressings and also the methods of cytotoxicity testing used in this work were presented. The first part of the experimental part of this thesis was focused on preparing already mentioned wound dressings. Then, their morphological changes over time and also the gradual release of incorporated active substances into the model environment were monitored. The gradual release of ampicillin was monitored not only spectrophotometrically, but also by ultra-high-performance chromatography. In wound dressings, in which collagenase was incorporated, was also the final proteolytic activity of this enzyme monitored. The effect of the active substances was observed on three selected microorganisms: Escherichia coli, Staphylococcus epidermidis and Candida glabrata. The cytotoxic effect of the active substances on the human keratinocyte cell line was monitored by MTT test and LDH test. A test for monitoring the rate of wound healing – a scratch test – was also performed.
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