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Raman spectrometry of pigments of cyanobacteria, algae and lichens in the astrobiology context
Kovács, Michal ; Jehlička, Jan (advisor) ; Osterrothová, Kateřina (referee)
This work deals with the possibility of Raman spectroscopical identification of selected biomarkers of extremophile species. It focuses mainly on selected cyanobacteria, algae and lichens with an emphasis on the ability to detect carotenoids. These pigments exhibit three characteristic bands of Raman spectra which represent stretching vibrations C=C; C-C and bending vibration C-CH3 in molecules of carotenoids. Raman spectra were measured not only by laboratory microspectrometers (λ - 514 nm and 532 nm), but also by portable and handheld spectrometers (λ - 532 nm, 785 nm and 700 - 1100 nm). In the case of cyanobacteria, the spectroscopical analysis was performed also on the fractions obtained by high performance liquid chromatography (HPLC). This work critically evaluates the possibilities of Raman spectroscopy to identify the carotenoids of cyanobacteria, algae and lichens. Besides the signal of carotenoids, interpretation of other bands in the Raman spectra corresponding to the presence of other biomarkers is given here for selected samples. The obtained Raman spectra of carotenoids should be interpreted with great caution, because of the ifluence of several factors, which potentially cause unsystematic shifts in the positions of Raman bands (carotenoids bond in biological tissue, interactions with...
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Factors affecting deposition of selected antimicrobial substances into the egg structures
Pokorná, Monika ; Javůrková, Veronika (advisor) ; Svobodová, Jana (referee)
Both during the ovogenesis and immediately after the laying is a bird egg exposed to strong pressure from the microorganisms which are able to penetrate the egg through eggshell pores and infect its inner structures. With regard to the proved negative effects on hatchability, viability and phenotype of offspring, a cascade of obstacles has evolved which are able to minimize the risk of bacterial infection. The deposition of antimicrobial components into the eggshell and the egg white is considered to be one of them. A whole group of egg white proteins belong to them, among which lysozyme and ovotransferrin, which are also partially deposited into the eggshell and cuticular layer of the eggshell, dominate with their antimicrobial effect. The implication of the newest studies is that the microbial protection of the egg can be also performed by the eggshell pigments - biliverdin and protoporphyrin, which protect the egg from being colonized by microorganisms with an increased UV light and regulation of conductivity and water vapour condensation on the egg surface. Even though the presence of these antimicrobial components in different structures of the egg has been proved, there is no known comparative study which addresses the relation between deposition of selected antimicrobial components into...
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Biochemical changes accompanying the aging of red wine
Vacková, Tereza ; Hudeček, Jiří (advisor) ; Entlicher, Gustav (referee)
Flavonoids are plant secondary metabolites, which belong to several groups varying in their chemical structure. Anthocyanins and tannins are important flavonoid components of wine that are responsible for its color, taste and other sensory properties. The concentration of anthocyanins in wine is affected by grape variety, processing technology, and climatic conditions. In this Thesis, we studied the changes in color and in related chemical composition, using three non-commercial samples of red wine: Svatovavřinecké (year 2010 and 2012), and home-made wine (prepared without addition of SO2). These changes in color were determined using standard colorimetric method (CIELab) and also a simplified two-parametric spectrophotometric method (tint/color density). The content of anthocyanins was followed using analytical RP-HPLC method. In paralel, simplified oenologic methods for estimation of phenolic compounds were used. Generally the wine samples changed color to darker tint. Chemically, this was caused by polymerisation reactions between anthocyanins and phenolic compounds. This led to the formation of stable pigments characterised by a higher absorption maximum at longetr wavelength, hence a darker tint. Key words: anthocyanins, color, red wine, phenolic compounds, malvidin-3-glucosid, polymeric reactions,...
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Identification of milk and collagenous binders used in colour layers in art works
Kofroňová, Pavla ; Hrdličková Kučková, Štěpánka (advisor) ; Čapek Adamec, Martin (referee)
The task of this diploma thesis was to investigate the influence of inorganic pigments on the identification of casein oil and animal glue tempera by mass spectrometry MALDI- -TOF MS (Matrix-Assisted Laser Desorption/Ionisation - Time of Flight Mass Spectrometry). First, it was necessary to prepare a set of model colour layers containing casein and animal glue tempera together with ten inorganic pigments. Consequently, the method of peptide mass fingerprinting was used to obtain mass spectra of the samples. Finally, it was possible to compare and determine the characteristic peptide fragments for both proteinaceous binders and find pigments that most affected the identification of casein and rabbit glue temperas. The obtained values of m/z casein oil tempera and animal glue tempera were used to improve and complete reference database of protein binders that is used to identify protein binders in works of art at the Institute of Chemical Technology in Prague.
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Biochemical Aspects of Artwork Restoring
Boledovičová, Petra ; Hudeček, Jiří (advisor) ; Kubíčková, Božena (referee)
The following bachelor thesis is focussed on findings on the field of art restoring in connection with its biochemical aspects. In itroduction is resumed brief history of art restoring and generally defined terms of preservation, restoring, art and paint. For better understanding basic paint techniques (aquarelle, gouache, tempera and oil painting), strata sequence and instruments and materials commonly used for art work are mentioned. Most frequently used organic and inorganic pigments are briefly mentioned, however this thesis is mainly focussed on applied organic compounds - lipids, proteins, polysacharides and terpenoids - its composition, characteristics, usagea nd possible interactions. The following thesis is written in czech. Key words: restoring, art work, paint, organic binders, lipids, proteins, polysacharides, terpenoids
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Identification of microbial pigments in evaporites using Raman spectroscopy: implications for astrobiology
Vítek, Petr ; Jehlička, Jan (advisor) ; Marshall, Craig P. (referee) ; Vandenabeele, Peter (referee)
Raman spectroscopy is a powerful tool for identification both inorganic and organic compounds including microbial biomolecules. Together with the fact, that it is considered to be the important nondestructive instrument for use on Mars within future robotic missions, it is necessary to assess its capabilities in scenarios relevant for both Martian and terrestrial conditions. In this work, the potential of Raman spectrometry was tested - including both bench-top laboratory systems as well as portable counterparts - to detect traces of life within evaporitic matrices through biomolecular identification. Due to their chemical and physical nature resulting in optical properties, pigments are important organic compounds in Raman spectroscopic analysis using visible excitation. Hence in this work we have focused on the Raman spectroscopic identification of pigments as biomarkers with relevance for investigation of life in both extreme terrestrial and potentially extraterrestrial environments. Results of methodical work are presented in Appendices I to III, dealing particularly with β-carotene as a model carotenoid pigment. The concentration limits of this biomarker in three different evaporitic matrices (halite, gypsum and epsomite) have been determined for artificially prepared powdered mixtures alone...
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Production of Selected Microbial Metabolites and Energy Using Different Waste Materials
Petrik, Siniša ; Rychtera, Mojmír (referee) ; Němec, Miroslav (referee) ; Pekař, Miloslav (referee) ; Márová, Ivana (advisor)
Pro zpracování a nakládání s odpadními substráty lze použít řadu postupů a možností. Stále se rozšiřující spektrum metod a technologií umožňuje další využití materiálů a energie ve formě obnovitelných zdrojů. Jedním z řešení pro zpětné získávání některých odpadních materiálů je využití tzv. bílé (průmyslové) biotechnologie, která zahrnuje praktickou aplikaci metabolických aktivit celé řady různých mikroorganizmů včetně jejich specifických biologických drah k produkci látek s vysokou přidanou hodnotou. V předložené práci screeningového typu bylo pro zhodnocení odpadních surovin využito několik druhů mikroorganizmů kultivovaných za různých specifických podmínek včetně kultivace na odpadních materiálech získaných zejména ze zemědělství a potravinářství. Cílem bylo získání vybraných typů průmyslově cenných metabolitů, případně energie. Předložená studie byla zaměřena na srovnání růstu a produkčních vlastností několika kmenů karotenogenních kvasinek rodu Rhodotorula, Sporobolomyces a Cystofilobasidium, kultivovaných v médiích s obsahem glycerolu (technický a odpadní glycerol), dále v médiích obsahujících pšeničnou slámu, hydrolyzovanou slámu zpracovanou v hydrotermálním procesu při vysoké teplotě a zbytky po filtraci hydrolyzátu. Dalším testovaným odpadním substrátem byla syrovátka. Všechny testované kvasinky byly schopny využít glycerol jako jediný zdroj uhlíku. Produkce biomasy při kultivaci na technickém glycerolu se více či méně přibližovala kontrole (cca 7 - 10 gl-1), zatímco při kultivaci na odpadním glycerolu byla produkce vyšší (10.9 - 14.5 gl-1). Produkce karotenoidů a ergosterolu byla vyšší v glukózovém médiu než v médiu s obsahem glycerolu. Všechny testované kvasinky byly rovněž schopny produkovat neutrální lipidy, a to v rozmezí 11 - 15 %, s výjimkou C. capitatum, kde produkce dosahovala více než 22 % obsahu neutrálních lipidů. Pšeničná sláma a produkty z ní připravené se ukázaly být využitelnými substráty s vysokým potenciálem pro produkci biomasy i metabolitů, a to zejména u kmene S. roseus. Syrovátka, jako odpadní produkt mlékarenství, byla účinně využita jako substrát pro kokultivaci karotenogenních kvasinek a bakterií mléčného kvašení. Kokultivační proces může vyvolat nadprodukci pigmentů a ergosterolu, přičemž získaná biomasa díky obohacení o bakterie L. casei dosahovala vyšší kvality. Za účelem energetického využití mikrobiálního metabolismu formou mikrobiálních palivových článků, tzv. „Microbial Fuel Cell“ byla aplikována směsná kultura bakterií získaných z čistírny odpadních vod. Tyto mikroorganizmy hrají významnou roli při výrobě elektrické energie a současně také při čištění odpadních vod. Elektřina je generována přímo z organických látek přítomných v kultivačním médiu a lze ji použít pro provoz čistírny samotné a případně i pro další aplikace.
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Study of the influence of additions on the durability of aerated concrete
Halešová, Adéla ; Voves, Jiří (referee) ; Hubáček, Adam (advisor)
The aim of this work is to summarise and consider the possibilities of using admixtures and their influence on the durability of aerated concrete.This bachelor's thesis is based on research findings concerning aerated concrete. Furthermore, it deals with the study of inert and active additions. The experimental part is focused on testing trial samples with the addition of admixtures. It examines what is the rate of the possible chosen physically-mechanical features such as the rate of air density, the durability of surface against the effect of water and chemical defrosting substances and achieving the required strength.
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Conditioning of Organic Pigments in Carbon Dioxide
Eliáš, Z. ; Vyňuchal, J. ; Krystyník, Pavel ; Klusoň, Petr
A patent review in area of conditionation of organic pigments in supercritical fluid was presented. The results of conditioning with various polycyclic pigments and azo dyes in supercritical CO2 were discussed. Special attention was paid to unpublished extractional conditioning that can lead to significant removal of residual solvents or contaminants from pigments with lower expenses and shorter time than with utilization of well-estabilished current procedures.
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