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Challenges in Optimal Bandwidth for Medical Image Transfer
Schindler, Vladimír ; Šimák, Boris (referee) ; Šárek, Milan (referee) ; Dostál, Otto (advisor)
This dissertation thesis is focused on the optimization of bandwidth parameters for the transport of medical image data between medical devices and remote data storage. As real and fully functional structure, which will be analyzed in this work. It was selected system MeDiMed (Metropolitan Digital Imaging System in Medicine). The thesis examines the operation of the small health organizations and their modalities, which use this system for remote data archiving. Traffic analysis is then statistically processed. The thesis also deals with the analysis of increasing the security during accessing health system, and assesses its impact on transmitted data. The effect of setting the transmission parameters and the most widely used types of ciphers on the transfer speed is also compared.
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Patient data management in hospital information system Clinicom
Jirásková, Kristýna ; Fedra, Petr (referee) ; Škutková, Helena (advisor)
Hospital information systems to store patient data and to share them. Have several advantages. Doctors are immediately accessible to history, which helps to quickly diagnose, prevent unnecessary wastage of drugs and duplicate tests. The goal of this work was to develop remote access to hospital information system CLINICOM via the Internet. The data in the information system managed by the database system Caché. From this database information was obtained using SQL queries. For the presentation of data on the Internet was designed and implemented user interface in the PHP programming language, which enables remote database management system CLINICOM.
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Neuroinformatics and sharing data from medical imaging systems
Klimek, Martin ; Kubásek, Miroslav (referee) ; Provazník, Ivo (advisor)
The presented master's thesis deals with the issue of storing and sharing data from medical imaging systems. This thesis, inter alia, consists of organizational and informatics aspects of medical imaging systems data in multicentric studies containing MRI brain images. This thesis also includes technical design of a web-based application for image data sharing including a web interface suitable for manipulation with the image data stored in a database.
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Radiography image preprocessing tools
Chmelař, Petr ; Richter, Miloslav (referee) ; Petyovský, Petr (advisor)
This thesis deals with design and realization of methods of preprocessing of X-ray images and its storage. In the first part of this thesis, there were designed and implemented methods for preprocessing of series of X-ray images such as averaging after image registration or merging of images to a HDR image using Debevec method. In the following part of the thesis, there was done a literary research of data formats based on which was implemented a library for x-ray images storage. Both implemented methods allow to reduce a random noise by merging a series of images. Application of the Debevec method also allow to increase a dynamic range of image.
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Perfusion image processing
Dolníček, Petr ; Dvořák, Pavel (referee) ; Mikulka, Jan (advisor)
The goal of this diploma thesis was to create a script in MATLAB, which is capable to load DICOM pictures, read the data in their headers and then select the right series for perfusion analysis. This analysis is based on detection of contrast fluid in bloodstream and tissue and right interpretation of concentration changes of this fluid in time. This work is trying to describe a way of building an ultimate system capable of autonomous tumor analysis and classification. In the end, there is an analysis of DICOM sample performed by created script.
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Database Archive of Medical Image Data
Lerch, Kamil ; Přibyl, Bronislav (referee) ; Kršek, Přemysl (advisor)
The work deals with the management and display of medical images. Analyzes the problem of obtaining information from medical DICOM and efficient storage. The system is designed as an application with a graphical client. Provides an interface for importing data in a format DICOM and interface for retrieval of data in the database and display them. The implementation was done in Java with support for SQLite.
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MRI image segmantation based on edge detection
Simichanidis, Michail ; Lamoš, Martin (referee) ; Harabiš, Vratislav (advisor)
Cílem této práce je představit základní segmentační techniky používáné v oblasti medicínského zpracování obrazových dat a pomocí 3D prohlížeče schopného zobrazit 3D obrazy implementovat segmentační modul založený na hranové detekci a vyhodnotit výsledky. Navrhovaný prohlížeč je sestavený v prostředi Matlab GUI a je schopen načíst objem 3D snímků představující lidskou hlavu. Navrhovaný segmentační modul je založen na použití hranových detektorů, zejména Cannyho detektoru.
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System for 3D data visualisation in virtual reality
Kalafut, Oliver ; Mašek, Jan (referee) ; Kolařík, Martin (advisor)
This bachelor thesis deals with the imaging of medical models, for example human body organs, in virtual reality via Oculus Go. Oculus Go is an all-in-one device with a powerful processor and high-resolution display that is ideal for this bachelor thesis. The main goal is the conversion of 2D and 3D medical data formats, including formats such as DICOM and NIfTI, into 3D formats usable for virtual reality and then create the application. The first part of this work is devoted to the theoretical introduction and introduces the issues of virtual reality and 3D modelling to the reader. Then in the practical part, there was implemented a standalone (offline) application for display and interaction of used medical models with users in the virtual reality environment. In total, eight models of different parts of the human body were processed and converted to a uniform 3D Object (.obj) format. Subsequently, they were imported into program Unity, in which I created the entire application environment called Model Preview VR. The application enables viewing, zooming, rotating, and cross-section features of individual objects and is suitable for the presentation of simple models. This application can be helpful for development of not only medical imaging, but also for getting quality photos for publishing.
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