|
|
Semantic description of the embedded device screen
Horák, Martin ; Richter, Miloslav (referee) ; Janáková, Ilona (advisor)
Tato diplomová práce se zabývá detekcí prvků uživatelského rozhraní na obrázku displejetiskárny za použití konvolučních neuronových sítí. V teoretické části je provedena rešeršesoučasně používaných architektur pro detekci objektů. V praktické čísti je probrána tvorbagalerie, učení a vyhodnocování vybraných modelů za použití Tensorflow ObjectDetectionAPI. Závěr práce pojednává o vhodnosti vycvičených modelů pro zadaný úkol.
|
|
|
Weather Forecast Based on Different Sources
Hořák, Martin ; Kořenek, Jan (referee) ; Novotný, Tomáš (advisor)
Bachelor thesis deals with the weather forecast through the artificial neural network with backpropagation method. The forecast is based on data obtained from freely accessible services offering weather information. The created application downloads and saves the forecasts from servers and creates a new forecast. The results of the prediction are being compared with the reality and the original services.
|
|
|
The role of CRMP2 in the nervous system development.
Žiak, Jakub ; Balaštík, Martin (advisor) ; Jiruška, Přemysl (referee) ; Horák, Martin (referee)
Regulation of axon guidance and pruning of inappropriate synapses is key to development of neural circuits. Secreted semaphorins are integral part of both processes. Collapsin response mediator protein 2 (CRMP2) has been shown to regulate axon guidance by mediating Semaphorin 3A (Sema3A) signaling, however, nothing is known about its role in the synapse pruning. Similarly, it is also not known if CRMP2 mediates signals from other semaphorins. We herein studied CRMP2 protein and revealed its role in growth and pruning of selected axons and dendrites. In newly generated crmp2-/- and crmp2a-/- mice we demonstrate that CRMP2 has a moderate effect on Sema3A-dependent axon guidance in vivo, and its deficiency leads to a mild defect in axon guidance in peripheral nerves and corpus callosum. CRMP2A isoform is specifically involved in development of callosal axons. Surprisingly, we show that crmp2-/- mice display prominent defects in stereotyped axon pruning in hippocampus and visual cortex and altered dendritic spine remodeling, which are consistent with impaired Sema3F signaling and with models of autism spectrum disorder (ASD). Indeed, we demonstrate that CRMP2 mediates Sema3F signaling in primary neurons and that crmp2-/- mice display ASD-related social behavior changes in early postnatal period as well...
|
|
|
Molecular mechanisms of regulation of trafficking and function of different subtypes of NMDA receptors in hippocampal neurons
Skřenková, Kristýna ; Horák, Martin (advisor) ; Balík, Aleš (referee) ; Bendová, Zdeňka (referee)
of Ph.D. thesis Molecular mechanisms of regulation of trafficking and function of different subtypes of NMDA receptors in hippocampal neurons Mgr. Kristýna Skřenková N-methyl-D-aspartate (NMDA) receptors are ionotropic glutamate receptors that play a key role in the mammalian central nervous system. Under physiological conditions, these receptors are important for excitatory synaptic transmission and memory formation. However, under pathological conditions, their abnormal regulation or activation may lead to many neurological and psychiatric disorders, such as Alzheimer's disease, Parkinson's disease, Huntington's disease, epilepsy or schizophrenia. Previous studies have shown that the number and type of NMDA receptors on the cell surface are regulated at multiple levels, including their synthesis, folding, internalization or degradation. During the trafficking of NMDA receptors to the cell surface membrane, both the agonist binding and receptor activation are examined. Moreover, NMDA receptors undergo many posttranslational modifications such as palmitoylation, phosphorylation or N-glycosylation. In this thesis, we studied the molecular mechanisms that may affect the trafficking and functional properties of NMDA receptors in mammalian cells and rat hippocampal neurons. Specifically, we studied i)...
|
|
|
Baroque sculpture workshop of Andreas Philipp and Johann Anton Quitteiner
Hořák, Martin ; Adamcová, Kateřina (advisor) ; Oulíková, Petra (referee) ; Zápalková, Helena (referee)
The Quitteiner family sculpture workshop operated in Prague from the turn of the 18th century to the year 1765. The span of its existence is delimited on one side by the arrival of its founder, Andreas Philipp Quitteiner (1679-1729), from Frýdlant in northern Bohemia, and on the other side by the death of the upholder of the family tradition, Johann Anton Quitteiner (1709-1765). During the lifetime of Quitteiner Senior the workshop built its reputation as the leading Prague- based sculpture studio. A. F. Quitteiner strengthened his position while working in the Württemberg region in 1709-1712, and then in 1713 and 1714, when he participated together with other Prague artists in decorating the palace residence at Ludwigsburg. After his return to Prague the elder Quitteiner won recognition alongside the most prominent figures of Czech Baroque sculpture F. M. Brokoff and M. B. Braun, and created his best works, including four statues on the side altars of the Holy Family and Saint John of Nepomuk in Saint Thomas's church in Prague's Lesser Quarter. Quitteiner's son Johann Anton learnt his craft in the family workshop which he took over after his father's death. The starting point for his work was the realistic style of his father. He built on this foundation, however, adding to it elements of...
|
|
| |
|
|
Regulation of NMDA receptor trafficking in mammalian cells
Hemelíková, Katarína ; Horák, Martin (advisor) ; Novotný, Jiří (referee) ; Valeš, Karel (referee)
N-methyl-D-aspartate (NMDA) receptors are a subclass of glutamate receptors that play an essential role in mediating excitatory neurotransmission and synaptic plasticity in the mammalian central nervous system (CNS). The activation of NMDA receptors plays a key role in brain development and memory formation. Abnormal regulation of NMDA receptors plays a critical role in the etiology of many neuropsychiatric disorders. NMDA receptors form a heterotetrameric complex composed of GluN1, GluN2(A-D) and GluN3(A, B) subunits. The NMDA receptors surface expression is regulated at multiple levels including early processing (synthesis, subunit assembly, endoplasmic reticulum (ER) processing, intracellular trafficking to the cell surface), internalization, recycling and degradation. NMDA receptors are regulated by the availability of GluN subunits within the ER, the presence of ER retention and export signals, and posttranslational modifications including phosphorylation and palmitoylation. However, the role of N-glycosylation in regulating of NMDA receptor processing has not been studied in detail. The aim of this study was to clarify the mechanisms of regulation of surface expression and functional properties of NMDA receptors. We used a combination of molecular biology, microscopy, biochemistry and...
|
|
|
Function of the GABA and glycine receptors in the mammalian MNTB
Hrušková, Bohdana ; Tureček, Rostislav (advisor) ; Vyklický, Ladislav (referee) ; Horák, Martin (referee)
GABA and glycine are major inhibitory neurotransmitters in the central nervous system. They act on ionotropic and metabotropic receptors that form oligomeric complexes in plasma membrane of neuronal cells. Pharmacological properties, subcellular distribution and function of GABA and glycine receptors depend on their subunit composition. The thesis was aimed to find subunit composition and physiological role of ionotropic glycine and metabotropic GABAB receptors in neurons of medial nucleus of trapezoid body, MNTB. The nucleus resides in the mammalian auditory brainstem and it is characterized by well defined excitatory and inhibitory inputs. Excitatory fibers form giant glutamatergic nerve terminals, calyces of Held, whereas inhibitory fibers form small GABA/glycinergic boutons. Both types of afferents innervate somatodenritic parts of MNTB principal neurons. The nucleus thus represents a suitable model for studying molecular and cellular mechanisms of interactions between excitation and inhibition. Our experiments were performed using electrophysiology and immunohistochemistry methods. Patch clamp technique was used to record membrane currents and voltages from neurons in live MNTB slices isolated from rats or mice. Spontaneous and sound-evoked activity of murine MNTB neurons was recorded by in...
|
|
|
Glutamate Receptors and Endoplasmic Reticulum Quality Control
Tachezy, Ruth ; Horák, Martin (advisor) ; Adámek, Pavel (referee)
Quality control (QC) is a collection of processes taking part in the biogenesis and architecture of proteins. The objective of this thesis is to describe these processes in detail. QC takes place on many different levels in various compartments of the cell. The focus is on the endoplasmic reticulum (ER) QC interconnected with cytosolic QC. There are multiple steps involved in ERQC: several types of protein translocation to the ER lumen, glycosylation, disulfide bond formation via protein disulfide isomerase, chaperones that assist to achieve a correct conformation, and ER- associated degradation pathway for retranslocation of misfolded proteins back to the cytoplasm, where they are degraded. Cytosolic QC is interconnected with the ERQC through various ways of translocation of proteins to the ER membrane or lumen. Proteins that are retranslocated from ER to the cytosol are ubiquitinated and subsequently degraded in the proteasome. Ubiquitination is a process of targeting a protein for degradation. Cytosolic chaperones and other cellular structures, such as aggresomes, juxtanuclear compartments, and insoluble protein deposits, take part in the ubiquitination. Calcium dysregulation that is linked to QC and correct protein folding in ER is also described. Some of the possible consequences of protein...
|
|
|
Structural determinants of regulation of surface delivery of NMDA receptors in mammalian cells
Danačíková, Šárka ; Horák, Martin (advisor) ; Bendová, Zdeňka (referee)
N-methyl-D-aspartate (NMDA) receptors are ligand-gated ion channels activated by agonist glutamate and co-agonist glycine. They play a key role in mediating the fast excitatory synaptic neurotransmission in the mammalian central nervous system. To create a functional heterotetrameric receptor, the presence of two GluN1 subunits combined with GluN2 or GluN3 subunits is necessary. Previous studies confirmed the importance of M3 transmembrane helix and extracellularly localized cysteines in regulation of surface expression of functional NMDA receptors. The aim of my thesis is to elucidate an influence of clinically relevant mutations in M3 transmembrane helix and the role of all known cysteines that form disulphide bonds on surface delivery of NMDA receptor expressed in heterologous monkey kidney fibroblasts cell culture (COS-7). Using molecular biology methods, immunocytochemistry and microscopy I found that the clinically relevant mutations M641I and Y647S in GluN1 subunit and also the mutations of particular cysteines forming disulphide bonds caused substantial decrease of surface expression of NMDA receptors. Furthermore, I discovered that the effect of mutated GluN1 subunits on decrease of surface expression depends on the subunit composition. The contribution of my results lies in elucidating the...
|
guest ::
RSS feed.