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Defence mechanisms of phytoplankton exposed to UV radiation
Dvořáková, Jana ; Němcová, Yvonne (advisor) ; Pichrtová, Martina (referee)
Phytoplankton builds an important part of energy flow in the Earth's ecosystem. It forms the basis of the food chain and represents main primary producers. The question arises, due to the continuing ozone depletion, what impact may cause the increasing intensity of UV radiation on aquatic ecosystems. Especially UV-B radiation is capable of penetrating depp into the water column and affects the key physiological processes (e.g. growth, reproduction) and causes acute physiological stress to aquatic organisms including phytoplankton. The gole of my thesis is to summarize the studies focused on the impact of UV radiation on planktonic algae and the defense mechanisms that reduce the negative effects of UV radiation. These mechanisms may be devided into three groups: active avoidance, production of UV-absorbing substances and repairs of damage induced by UV radiation. Powered by TCPDF (www.tcpdf.org)
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Mechanisms of DNA repair in the moss Physcomitrella patens
Holá, Marcela ; Angelis, Karel (advisor) ; Bříza, Jindřich (referee) ; Fajkus, Jiří (referee)
Over the course of an organism's life, its genome is exposed to endogenous and exogenous chemical, physical and biological agents - genotoxins. These genotoxins alter its basic structural components - sugar residues, phosphodiester bonds, and nitrogenous bases. Organisms have therefore evolved a plethora of different strategies to both repair DNA lesions and maintain genomic stability. These DNA repair pathways are linked with several other cell pathways, including chromatin remodelling, DNA replication, transcription, cell cycle control, apoptosis - programmed cell death (PCD), thereby providing a coordinated cellular response to DNA damage. Biochemical mechanisms of DNA repair are relatively well understood in yeast and mammals, however, far less so in plants. While these repair mechanisms are evolutionary conserved, significant differences still remain. Therefore, further investigation is required. This thesis summarises the introduction of a novel plant model - the moss, Physcomitrella patens (Physcomitrella). As a haploid gametophyte with unique characteristics of high frequency of homologous recombination (HR), and apical growth of filaments, it is an ideal organism to study DNA repair in plants. Previous research on Physcomitrella regarding mechanisms of DNA lesion repair induced by...
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Simple Electrochemical DNA Biosensor for Detection of DNA Damage Caused by UV Radiation
Arustamian, Daria ; Vyskočil, Vlastimil (advisor) ; Dejmková, Hana (referee)
Ultraviolet (UV) radiation is a common DNA damaging agent. Major DNA lesions, such as cyclobutane pyrimidine dimers (CPDs) and pyrimidine-(6-4)-pyrimidone (6-4PPs) photoproducts, are carcinogenic and mutagenic. UV induced DNA damage was investigated using a simple electrochemical DNA biosensor based on an ultra-trace graphite electrode (UTGE) and low molecular weight doble-stranded DNA (dsDNA) from salmon sperm. Biosensor was prepared using adsorption of dsDNA on a surface of the UTGE and then used to detect UV-induced DNA damage. Effects of UV radiation were investigated using a combination of several electrochemical technics: square-wave voltammetry (SWV) for direct monitoring of DNA base oxidation and cyclic voltammetry (CV) and electrochemical impedance spectroscopy (EIS), as non-direct methods, using redox-active indicator [Fe(CN)6]4-/3- . CV and EIS, which allow characterization of electrode surface, were used to optimize preparation of the dsDNA/UTGE biosensor. Prepared dsDNA/UTGE biosensor was exposed to UV radiation using UV lamp with two set wavelengths: UVC of 254 nm and UVA of 365 nm. UVC radiation was used to damage DNA. Relative signal decrease was 50% after 20 minutes of exposure to UVC radiation. UVA radiation was used to compare effects of different types of UV radiation. Obtained...
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Printed chemical sensors of UV light
Fanglová, Michaela ; Čeppan, Michal (referee) ; Veselý, Michal (advisor)
The main task of the bacherol´s thesis was to prepare a photosensitive layer reacting to the radiation dose with a color change. And to calibrate the prepared dosimeters to the required values of the radiation doses of the UVB radiation. This bacherol´s thesis is about light dosimeters, which are based on photochemical reactions. These reactions take place in a thin polymer layer. The experimental study focoused on the preparation and application of photosensitive compositions. These prepared dosimeter compositions were exposed to different doses of UVB radiation, where the color response to the exposure was monitored.
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Metabolic and biophysical characterization of bacterial cells capable of PHA accumulation
Slaninová, Eva ; Lehocký, Marián (referee) ; Doškař, Jiří (referee) ; Chodak, Ivan (referee) ; Obruča, Stanislav (advisor)
This thesis deals with the characterization of bacterial cells capable of polyhydroxyalkanoates (PHA) accumulation. The dissertation thesis is written in the form of a discussed published publications which are attached to the thesis as appendixes. The work develops a study of the current topic of the protective functions of PHA and clarifies protective mechanisms against selected stressors. Firstly, we focused on the protective effects of PHA granules against UV radiation and osmotic stress, specifically hypotonic conditions. In the case of UV exposition, the cells protected themselves by scattering UV radiation on the intracellular granules protecting especially nucleoid. When exposed to osmotic stress, the amorphous state of PHA granules is very important since it is capable of stabilization of cell membranes under hypertonic stress, afterwards, bacterial cells can maintain their integrity during the subsequent hypotonic challenge. In general, the amorphous state of PHA granules is key to ensure the proper biological functions of PHA whether as storage or protective polymer. Therefore, in the next part of this work, we focused on the core of the stabilization mechanism that protects native PHA granules from crystallization and thus the intracellular polymer maintains in a thermodynamically unfavorable amorphous phase state. Based on experimental work, we applied selected stresses because we proposed a new model of stabilization of the amorphous state of PHA granules in vivo. It consists of two mechanisms, where small volumes of PHA granules reduce the rates of crystallization and at the same time the water present in the granules plays the role of a low molecular plasticizer. Due to the metabolic apparatus of bacterial cells, PHA are simultaneously synthesized and degraded which leads to an increment of intracellular concentration of monomers that also figure in the protective effect of PHA. In this context, we aimed at the description of the mechanism of cryoprotective effects of 3-hydroxybutyrate, the monomer of the most common of PHA, poly(3-hydroxybutyrate). Hence, we constructed an equilibrium and non-equilibrium phase diagram of the 3HB-water system to prove that 3HB is a very effective cryoprotectant. This fundamental understanding of the protective properties of PHA monomers could be also used in the food industry or cryopreservation of biological samples.
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Kinetic study of photochemical reactions in thin printed layer
Rudická, Andrea ; Čeppan,, Michal (referee) ; Veselý, Michal (advisor)
This diploma thesis deals with a study of kinetics of photochemical reactions in a thin printed polymer layer. The experimental part deals with the composition preparation and layers coating. The prepared layers were exposed and subsequently studied for their colour response to the light. The aim of this work was to prepare a photosensitive layer with a significant colour change between individual doses of radiation, to improve the mechanical resistance of the layers, to adjust the sensitivity of the compositions to UVB radiation and to study the kinetics of the photochemical reaction used.
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Determination durability of modular panel elements in different exposures
Škvařil, Michael ; Žák, Antonín (referee) ; Vaněrek, Jan (advisor)
Within the theoretical part of the diploma thesis, a list of the main types of accelerated tests designed for the resistance of metal and polymer surface finishes. In the experimental part of diploma thesis, the rate of biological resistance of wood-based board materials is evaluated. Furthermore, the resistance of coating systems is assessed by means of accelerated tests. Resistance of modular building shells is primarily focused on degradation of coatings applied primarily on metal materials and wood materials. The tested coating systems analyze the influence of the materials and chemical base on the final weather resistance.
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Study of rehabilitation of selected part of sewer network
Dvořák, Pavel ; Helcelet, Marek (referee) ; Raclavský, Jaroslav (advisor)
The topic of this thesis is to create a study of the rehabilitation of the sewer network. The sewer system under assessment is located in city Znojmo, specifically Znojmo – city. In this case, rehabilitation is proposed in order to improve the functional operational properties of the sewer network and extend its service life. The work was divided into two basic parts, namely the Accompanying and Summary Technical Report. Three variants of solution were proposed. The first two variants are made as trenchless using a sanitation sleeve in the first one and a short sanitation sleeve in combination with a sanitation sleeve in the second. The third variant is made as an open excavation recovery. A description of the rehabilitation technology was carried out and the facts that each individual Option or what the three Option would bring up were defined. These three variants of the solution are assessed in terms of economic, technical and environmental impact.
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Study of UV-generated fluorescent zinc complexes by fluorescence spectroscopy
Havlíková, Martina ; Vaculovičová, Markéta (referee) ; Mravec, Filip (advisor)
This thesis focuses on the study of UV light-generated zinc complexes with cadmium and organic molecules SAM, SAH, CYS, HCYS and GSSG, specifically at 375 nm. Furthemore, the aim of the work is to characterize the precursors spectrally and temporally before and after irradiation in the transilluminator at 250 nm. Study of genesis these complexes was performed by FLIM. Thanks to this method, it was found that the formation of complexes occurs only with Zn:SAH, Zn:GSSG and Zn:Cd. The formation of complexes is influenced by the method of preparation. The spectral characteristic was performed on a fluorimeter where the increase in fluorescence intensity of the irradiated solution with the precursors was expected. These were turbid solutions where sedimentation of the particles was observed and the intensity of fluorescence was changed. In the Zn:SAM and Zn:CYS sample, the sedimentation increased in intensity, while in Zn:SAH and Zn:HCYS decreased. The Zn:Cd precursor solution was clear and there was no change in intensity. Zn:Cd showed the best spectral properties, while the Zn:SAM sample, whose excitation and emission maxima are very close to each other, appeared to be the worst. A sample with Zn:CYS and Zn:HCYS showed almost the same spectra and respective peak results. Based on lifetime characteristics by TCSPC, the sample with Zn:CYS, Zn:HCYS and Zn:GSSG, which showed 3 lifetimes, was best treated. Lifetime could not be unambiguously determined for SAM and SAH samples. Zn:Cd had 4 lifetimes
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Importance of UV perception for dragonflies (Odonata)
Jačmeněv, Vjačeslav ; Černý, Martin (advisor) ; Stella, David (referee)
It has long been known that some animals are able to perceive radiation at other wavelengths than perceive we humans. In dragonflies, UV sensitivity has been demonstrated in the 1974, however a recent study has unveiled an extraordinary diversity of genes of specific photoreceptor proteins known as opsins, including UV-sensitive opsin. In addition some dragonflies have coloration on their body and wings, which can reflect UV radiation at unchanged wavelength - UV reflectance. Very little is known about the use of UV in dragonfly life. My thesis summarizes the current knowledge of the importance of UV for dragonflies, focusing on interspecific and intraspecific communication.
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