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Continuous population model for single species in biology
Kozubík, Lukáš ; Čermák, Jan (referee) ; Štoudková Růžičková, Viera (advisor)
The goal of this bachelor thesis is to summarize and analyse some of the continuous population models for single species including an illustration of their application. The first chapter is about description of basic population models including briefly introducing their authors. The second chapter focuses on delay models. There is also an example of solving of an easy delay model in the program Matlab. The last chapter deals with the application of models on real data.
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Long-term population trends in urban birds in Europe and Czechia
Grünwald, Jan ; Reif, Jiří (advisor) ; Sedláček, Ondřej (referee)
Urbanization ranks among the most important processes induced by the human civilization that affects ecological communities at the same time. Birds are the most frequently studied organisms in relation to urbanization. Different birds' species show different abilities to adapt to urban areas, so urbanization works as an environmental filter. As urban environment undergoes extraordinarily high rate of change, the characteristics of the environmental filter are changing rapidly, too. This could influence populations of urban bird species. We can expect that the population change of the species will be related to the time since urbanization; specifically, the early urban colonizers will decline due to alteration of urban environment, while the recent urban colonizers will increase. I obtained data on population trends from 2000 to 2016 for 95 common urban bird species in 16 European countries. Thanks to the cooperation with local expert ornithologists, I collected the data about the time since urbanization of these species in respective countries and I related these two variables filtering out the influence of 9 other species-specific ecological characteristics. Bird population trends had a statistically significant relation to the time since urbanization: the species that became urbanized earlier...
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Supplementations of the Mallard and their impact on wild populations
Pechmanová, Hana ; Musil, Petr (advisor) ; Kreisinger, Jakub (referee)
The Mallard (Anas platyrhynchos) is quite a popular game bird species. In many states, particularly in Europe and North America, captive-rearing and releasing of mallards has become common practice in wildlife management. The aim of these supplementations is to boost the size of hunted populations. More than three million Mallards are released each year. This paper aims to summarize and assess the potential effects of captivity-reared Mallards on the wild populations. Supplementations of mallards pose a threat to the genetic identity and variability of wild populations and may potentially lead to morphological and behavioral changes. Breeding facilities can be source of many pathogens, so supplementations may lead to transmission of these pathogens into wild populations. All the factors mentioned above may thus affect the fitness and population dynamics of wild Mallards. This paper also briefly considers how the releases can affect other species and the environment. This issue is not well studied so more studies and appropriate monitoring are needed for an assessment of the rate of these processes.
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Population dynamics of Red-crested Pochard (Netta rufina)
Poláková, Klára ; Musil, Petr (advisor) ; Storch, David (referee)
This study is aimed at analysis of long-term and short-term changes in numbers of Red-crested Pochard (Netta rufina) in Třeboň region. This species is increasing in long-term period and it is also spreading into new localities in the Czech Republic. There were recorded two waves of arrival of Red-crested Pochard arrive, i.e. in April and in May. The total numbers were decreasing at the end of breeding season (from the beginning of July) in study area. The water surface area and area of littoral vegetation were found to be the most important factors affecting preference of individual ponds in pre-breeding season. Furthermore, water transparency seems to be important factor affecting numbers of broods, ducklings and adults in post-breeding season. Low numbers of broods per 1 female were recorded in years with high numbers of Red- crested Pochard at the start of breeding season. However, the frequency of brood parasitism was higher in these years. Key words: Netta rufina, Red-crested Pochard, population dynamics, ducks, breeding, numbers, brood parasitism, south Bohemia
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Intraspecific variability in population trends of farmland birds: influence of habitat and altitude
Hanzelka, Jan ; Reif, Jiří (advisor) ; Šálek, Miroslav (referee)
Farmland bird populations in Europe have been in decline for a long time. Agricultural intensification and growing a large share of crops that provide suboptimal breeding habitat could be the main causes of the observed decline. To explore these possible drivers, I focused on population trends of farmland bird species in different habitats in the Czech Republic over the periods 1982-1990 and 1990-2010. Specifically, I focused on the variability in trends within each species in respect to the differences in landscape management between the lowlands and mid-altitude areas before and after 1990. The expected effect of intensive farming in the lowlands until 1990 was reflected by a strong decline in populations of Northern Lapwing and Yellowhammer. The influence of less intensive farming in mid-altitude areas causing moderate population decline was confirmed rather by shrubs and trees species than farmland specialists. After 1990, less intensive farming in the lowlands should reduce the decline, which may have occurred, but compelling comparison of population trends between the two time periods was not possible for most species due to the lack of data. On the contrary, more intensive population decline in mid-altitudes after 1990, which should be the response to arable land abandonment, was not...
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Spatial correlations in population dynamics of spruce bark beetle (Ips typographus): Example of Mantel test usage
Šimera, Ondřej ; Kindlmann, Pavel (advisor) ; Ferenc, Michal (referee)
Spruce bark beetle (Ips typographus L.) is the most common and abundant beetle from the Scolytidae family in European forests. It is the most important biotic factor causing disturbances and affecting forest ecosystems. Thus, it recently became a subject of discussions, how to manage the forests properly in order to find an adequate equilibrium among economical, turistic and natural values of the forest. Many studies have shown a positive effect of bark beetle outbreaks on biodiversity and natural forest regeneration. It is hard to tell if these outbreaks are regular or not because there are many factors which can elicit them. However, just these factors can help us predict the probability of unforseen population outbreak. One of these methods can be monitoring of surrounding areas because these areas tend to be synchronised. For this purpose, multiple mathematical models can be performed, such as the Mantel test, which determines the correlation between two matrices. Keywords: Spruce bark beetle, Ips typographus, population dynamics, spatial correlations, Mantel test
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Effect of grazing and mowing on vegetation of dry grasslands
Pechová, Tereza ; Münzbergová, Zuzana (advisor) ; Čiháková, Kateřina (referee)
Grassland communities are natural part of our landscape. They were mostly created or maintained by human. If we leave them to their natural development they will disappear. Today grazing or mowing is recommended as an appropriate management. This work is an answer to the beginning of the grazing and mowing management in NPP Kaňk near Kutná Hora. Its goal is preparation for the monitoring of grazing and mowing, which will be in progress in this locality since year 2010.
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Mechanisms driving di- and tetraploid coexistence in mixed-ploidy populations of Tripleurospermum inodorum
Nedomová, Anežka ; Čertner, Martin (advisor) ; Dostálek, Tomáš (referee)
Genome duplication plays a significant role in plant evolution. Formation of new polyploids is generally considered to be rare. Nevertheless, under natural conditions mixed-ploidy populations occur in relatively large numbers. Only the observations in the cytotype contact zone can identify all the factors affecting the stability or instability of the population. Number of research focusing on study of cytotype coexistence in natural mixed-ploidy populations is still low. As a model system for the study of mechanisms governing cytotype coexistence was chosen the Tripleurospermum inodorum. Research focused on natural mixed-ploidy populations and also on planted mixed-ploidy populations. Permanent plots were located in south, west, northwest and north Bohemia. Field observations were supplemented by cultivation experiments carried out in the greenhouse. Several phenomena were discovered at the level of whole populations. Cytotype distribution in the plot was random. The spatial structure of natural populations was quickly changing even within a single season. Even between single plot evaluations the cytotype ratios varied. Three percent of all plants were triploid hybrids. Most often detected cytotype in soil seed bank was diploid cytotype. The study of population dynamics shows, that tetraploids are...
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Implication of snow leopard distribution, population dynamics and landscape genetics, and prey preference for its conservation in Nepal
Shrestha, Bikram ; Kindlmann, Pavel (advisor) ; Sedláček, František (referee) ; Červený, Jaroslav (referee)
This thesis deals with an endangered large mammal species - snow leopard, its distribution, population dynamics, landscape genetics and connectivity, trophic ecology and human-snow leopard conflicts in the Nepalese Himalaya (Sagarmatha National Park (SNP), Lower Mustang (LM) and Upper Manang (UM) in the Annapurna Conservation Area, during Wet and Dry seasons in 2014-2016. In the case of snow leopard study, we used data obtained from camera traps, scat's genetic analysis and monitoring of fresh pugmarks and scrapes while direct count method was used to study for its main prey, blue sheep and Himalayan tahr. In study 1, we assessed the determinants of habitat suitability of snow leopards using MaxEnt model and mapped the distribution of suitable habitat for snow leopards in Nepal. Altitude and Annual mean temperature are important common factors contributing to snow leopard habitat suitability within the area studied, which is indicated by both the percentage contribution of environmental variables and Jackknife test from MaxEnt model. Some other uncommon factors also seem to play a role, as they were important in at least one of the analyses. These were: distance from road, and precipitation of driest month but their importance has to be considered with caution. In study 2, we present our...
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Population dynamics of Minuartia smejkalii
Hrušková, Karolína ; Münzbergová, Zuzana (advisor) ; Dostál, Petr (referee)
Serpentine areas in the Czech Republic form minor but important islands in the landscape with specific chemical properties such as high content of magnesium and other heavy metals. Due to this, serpentine is toxic for most plants. Increased demands on the survival and occurrence of plants lead to the emergence of serpentine specialists obligatorily specialized in these extreme habitats. Currently, serpentine areas are threatened by gradual overgrowth of sites, insufficient or poor site management and fragmentation or shrinkage of sites due to anthropogenic activities. Along with the disappearing localities, the serpentine specialists, are becoming highly endangered. Minuartia smejkalii is highly endangered serpentine specialist with an endemic occurrence in the Czech Republic with great need of its conservation. The aim of the work was to collect data on population dynamics of the species and identify habitat and climatic factors affecting population growth. We studied dynamics in all existing 7 populations during the period from 2006 to 2020 were collected. We linked these data to information on population dynamics, habitat and climatic factors and analysed them using Integral projection models (IPM). The study presents the importance of individual habitat and climatic conditions on the dynamics...
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