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Nonindigenous amphibian and reptile species of the Near and Middle East
Pazderková, Marie ; Šmíd, Jiří (advisor) ; Brejcha, Jindřich (referee)
This literary review summarizes information about twelve reptile and amphibian species, which are nonindigenous for the Near and Middle East. The studied area comprises the following states: Bahrain, Egypt, Iraq, Iran, Israel, Jordan, Qatar, Kuwait, Lebanon, Oman, Yemen, Saudi Arabia, Syria, Turkey, United Arab Emirates, Palestine. Nonindigenous species are introduced to new localities mainly via human causation. It can be either unintentional, such as transportation of the animal along with agricultural crops or exotic plants, or intentional, such as releasing the animal into the wild by breeder. Introduction of nonindigenous species can have unfortunate consequences for the stability of the indigenous ecosystem. From a human point of view, nonindigenous species can negatively affect local agriculture. Key words: Nonindigenous species, invasive species, Near East, Middle East, ecosystem, introduction, reptile, amphibian
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Is vertebrate local biodiversity influenced by beaver activity?
Komár, Ondřej ; Munclinger, Pavel (advisor) ; Uhlíková, Jitka (referee)
Beavers (Castor spp.) are ecological engineers and keystone species thanks to their ability to significantly modify the landscape to suit their ecological needs. Beaver, however, do not only create suitable habitats for themselfs, but as well for the whole spectrum of other vertebrate species and thus they increase local species richness. Currently there are only two extant species of beaver, European beaver (Castor fiber) and North American beaver (Castor canadensis), but they do not differ in their ability to modify the local landscape under the same ecological conditions. The construction of a beaver dam on the water stream and the subsequent flooding of the landscape results in the creation of a beaver pond, which is suitable habitat for amphibians, freshwater turtles, water birds and shorebirds. Beavers also create suitable habitats for other semi-aquatic mammals such as muskrat (Ondatra zibethicus) and Eurasian river otter (Lutra lutra). The efect of beaver activity on the local richness of fish species is complex and depends on the water stream characteristics, such as the stream gradient. Beaver dams can also limit the movement of migratory fish to some extent, but the dams do not represents an absolute migration barrier. Beaver do not just affect vertebrate communities inhabiting aquatic...
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Ecology of the Tree of Heaven (Ailanthus altissima) in the Czech Republic
Stejskalová, Nikol ; Weiser, Martin (advisor) ; Pergl, Jan (referee)
The Tree of Heaven (Ailanthus altissima) is an invasive deciduous tree, which has spread to every continent except Antarctica from its original area. It came to the Czech Republic in the 19th century as ornamental tree to the gardens of castles and parks. Later it spread to surrounding cities, but also into wild nature. Nowadays we find it in the Czech Republic primarily in hotter and drier areas and human disturbed areas. Its occurrence in these areas may suggest ideal conditions, which A. altissima seeks for its growth and spread. Studied conditions in this bachelor thesis are light, temperature, soil, water availability and overall environment, which A. altissima finds in its native and non-native area. Limits for the individual conditions were investigated, and these could define, where A. altissima can appear and where it cannot. Then everything was linked to the conditions in the Czech Republic. The results show that its appearance in the Czech Republic is mostly affected by altitude and average annual temperature linked with it. Shading limits A. altissima, but less than it was expected. When it comes to soil and water availability, A. altissima is very undemanding. The question is if A. altissima has already managed to occupy every location where it is able to grow in the Czech Republic and...
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Aktivita raka mramorovaného v závislosti na reprodukčním cyklu
MARKOVÁ, Kateřina
The aim of this thesis was to elaborate a literature review on the topic of crayfish activity, in particular their feeding activity and the use of shelters, including an emphasis on the role of sex and the reproductive cycle. I also focused on the characteristics of the marbled crayfish, Procambarus virginalis Lyko, 2017 and its usability as a model organism. The experimental part of the thesis focused on comparing three groups of female marbled crayfish (with ovulum, with glair glands and without ovulum). Experiments have been carried out using a method for ecological assessment of feeding behavior and predator-prey relationship in various prey densities in the form of larvae of buzzer midge Chironomus plumosus (Linnaeus, 1758) by functional response analysis and subsequently tested for the effect of shelter presence at uniform prey densities levels. In our experiment, all three groups of tested females showed a type II functional response typical of predators. The results indicate that females without ovulum have been the most active in terms of food collection in all cases, with a generally positive effect of the presence of shelter. Females with employed ovulum are generally less active in terms of consumption, processing and overall aktivity due to hormonal, physiological and consequently behavioural changes. Females with glair glands behaved similarly to females with ovulum in our experiments, being more cautious and less active than females without ovulum. This was probably due to their increased gonadosomatic index (GSI) and, conversely, their decreased hepatopankreas to total body weight ratio, which renders these females unable to physiologically ingest large amounts of submitted food. Female GSI decreases again after ovulation, nevertheless, even females with already employed ovulum did not consume more food, as females prefer safety at this stage of the reproductive cycle. They are less active, move more slowly, spend more time in a shelter, tend to their eggs, and thus cannot devote themselves fully to hunting and prey processing. Regarding its life strategy, the marbled crayfish is a generally suitable model organism for use in various areas of research, however, it is important to take into account its rapid life and reproductive cycle and adapt the conditions of the given experiments to this fact, as the parallel use of female marbled crayfish at various stages of the reproductive cycle can modulate results in terms of their activity. Certain differences in the presented results may also be due to the origin of the experimental animals, as with very few exceptions all performed experiments with marbled crayfish have been carried out using laboratory individuals. A number of conditions that change seasonally in nature have been kept constant in the laboratory. Therefore, it is important to keep in mind that in wild, crayfish are also exposed to both biotic (predation pressure of various species of fish, birds or mammals) and abiotic (changes in temperature and water chemistry) factors that can influence food activity. Nevertheless, we assume that the patterns observed here will also be valid for female crayfish living in the wild nature. However, the lack of similar experiments leading to the elucidation of female activity depending on the stage of the reproductive cycle provides a room to investigate other, not just crayfish species.
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Safety Management System for Transport of Materials and Dangerous Substances
Klímová, Zdeňka ; Krejčí, Libor (referee) ; Adamec, Vladimír (advisor)
The task this master’s thesis was evaluated present status safety management system for transport of materials and dangerous substances. I looks this issues like whole in The theoretical part. I want to find all kritical locations. I analysis type of transport, transport routs, driver training, legislation and label the most transport of materials and dangerous substances. I want to found the risk to remove or cushion. I want to proposed preventive measures in the practical part.
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Selection of Contractor for Public Works Contracts
Brázdová, Eva ; Hromádka,, Vít (referee) ; Hanák, Tomáš (advisor)
In this work the author has focused on meeting with the process of assigning public contracts, on detail monitoring of the composition and number of quali-fying prerequisites and on evaluation criteria. To analyze such prerequisites and criteria the author used data from public contract information sub-system. Sub-sequently the gained information were processed and evaluated, including spe-cific projects. Eventually, based on the collected data, the author suggested gen-erally suitable structure of qualification prerequisites and evaluation criteria.
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Similarity/dissimilarity analysis of genomic data on the basis of graphical representation
Těthal, Jiří ; Provazník, Ivo (referee) ; Maděránková, Denisa (advisor)
The work deals with the identification of species of animal through the density of nucleotids of mitochondrial gene CO1. In the first part the theory summarized information about DNA barcoding and the mitochondria, cellular organel that with this method is closely related. The second part deals with virtually comparing different sequences using the density of nucleotides. For this it was created program, which uses two functions, the first of the specified nucleotide sequence calculates the density and one can compare the density by distance methods.
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Comparison of mitochondrial DNA for species identification
Labounek, René ; Provazník, Ivo (referee) ; Maděránková, Denisa (advisor)
The work deals with the method of recognizing species on the analysis of mitochondrial DNA segment. This analysis and classification using segment gene called CO1 in literatures such as barcode of life. In the beginning of work is analyzed the mitochondrial theory of heredity and conditions of formation of barcode. Practical use is based on this theory in creating database of barcodes generated to different animal species. Data used for creating the library are drawn from public databases NCBI and BOLD Systems. The next part of this work concerns about methods of comparison of the individual barcodes to the others and especially to the barcode of human. Three main computing methods were used tore these analyses: Needleman-Wunsch algorithm, Smith- Waterman algorithm and comparison of similarities using distance matrix. This work also concerns about transformation of DNA molecule sequences from symbols to numeric formats, which is required for the distance matrix comparison method. Algorithms for searching for a barcode of a species and vice versa were created to ease the work with data.
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Optimization Of Selected Proposed ČSN Elements For Road Design
Moravec, Karel ; Čepil, Jiří (referee) ; Radimský, Michal (advisor)
Subject of the work is comparison between the selected Czech standards elements for the road design and the standards in selected EU Member States. Based on the comparison and in agreement with the supervisor is designed to optimize the control elements of pitch towards sustainable transport safety. The work addresses the longitudinal gradients of motorways, expressways and other roads directionally divided according to standard ČSN 73 6101.
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Effect of nucleotide density vector's reduction on molecular identification of organisms
Kosková, Markéta ; Provazník, Ivo (referee) ; Maděránková, Denisa (advisor)
This work deals with the effect of nucleotide density vector's reduction on molecular identification of organisms. At the beginning of the theoretical part, the work explains the concept of species, its development and its mutations. The next section provides basics of taxonomy, particularly the molecular taxonomy and DNA barcoding, with a description of mitochondrial DNA and its usability in the identification of species. The end of the theoretical part provides information about the nucleotide density vectors which the practical part is focused on. Analysis of auxiliary values on nucleotide density vectors was accomplished in Matlab by evaluating 188 real DNA barcode sequences. The identification analysis of organism was performed with the best auxiliary value for 4 datasets of the reference barcode sequences and 5 datasets of analyzed sequences of same organisms. Afterwards, the evaluation of the analysis was done by using separate nucleotide density vectors of individual nucleotides and their amounts.
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