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Optic disc detection in video sequences from video ophthalmoscope
Čermák, Marek ; Mézl, Martin (referee) ; Odstrčilík, Jan (advisor)
This work is focused on automatic detection of optic disc in retinal images. There is briefly described anatomy of human eye, principles of retinal imaging and also overview of the methods used for optic disc detection. The practical part describes developed procedures for optic disc detection, ie detection based on watershed transform, active contours and also on region growing technique. The main method of this work is the method of circular transformation, which as the only one allowed to detect the optic disc on the images of video ophtalmoscope and also on the high quality images from fundus cameras. This method was tested on three datasets. The average overlap 92,44 % was achieved for HRF dataset, 91,03 for DRIONS dataset and 77,36 for images of video ophtalmoscope.
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Modelling for ultrasound perfusion imaging
Jakubík, Juraj ; Jiřík, Radovan (referee) ; Mézl, Martin (advisor)
This master thesis deals with the contrast agents and their application in the ultrasound perfusion analysis. It is focused on Bolus & Burst method which, as a combination of two approaches that have been used so far, allows an absolute quantification of perfusion parameters in the region of interest. Contrast agent concentration time sequence is modeled as a convolution of the parametrically defined arterial input function and the tissue residual funkction. Thesis discusses different mathematical models of these functions as well as the methods of the parameters estimation. The methods functionality is validated on simulated and also preclinical data.
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USB Ultrasound Imaging System
Kratochvíl, Tomáš ; Mézl, Martin (referee) ; Harabiš, Vratislav (advisor)
This master thesis deals with development and construction of ultrasound diagnostical system with USB interface. The main task is to study current usage of A mode ultrasound systems and methods of their construction. Following with own design of A mode ultrasound system with usage of assigned Olympus ultrasound transducer.
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Acquisition, Modeling and Signal Processing in Ultrasound Perfusion Imaging
Mézl, Martin ; Kozubek, Michal (referee) ; Flusser,, Jan (referee) ; Jiřík, Radovan (advisor)
This work deals with possibilities of ultrasound perfusion analysis for the absolute quantification of perfusion parameters. In the theoretical part of this work are discussed possibilities of using of the ultrasound contrast agents and approaches for the perfusion analysis. New methods for the perfusion analysis are suggested and tested in the practical part of this work. The methods are based on convolutional model in which the concentration of the contrast agent is modeled as aconvolution of the arterial input function and the tissue residual function. The feasibility of these methods for the absolute quantification of perfusion parameters is shown on data from phantom studies, simulations and also preclinical and clinical studies. The software for the whole process of the perfusion analysis was developed for using in hospitals.
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Laboratory exercise for RTG imaging systems
Kuchař, Otakar ; Macíček, Ondřej (referee) ; Mézl, Martin (advisor)
The aim of this Bachelor thesis is to study the X-ray and computed tomography. The theoretical section explains the basic physical principles, elementary particle, atom and ionizing. The following parts of the thesis deal with topics from the origin and various types of X-ray, to interaction of X-ray with tissue and X-ray detection. For computed tomography the thesis also explains data collection, the reconstruction of image using simple back projection, filtered back projection and algebraic reconstruction. In the practical part are analysed several measurements which were taken in the X-ray chamber designed for educational purposes by Leybold. The topics solve the attenuation of X-rays depending on the type and thickness of the material and the spectrum of the X-ray radiation. In the field of computerized tomography solve tasks as the change of contrast, parameters of acquisition and methods for reconstruction. The work includes prepared sample solutions to a laboratory experiments.
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Real-time ECG monitoring
Valentová, Vanessa ; Mézl, Martin (referee) ; Šikner, Tomáš (advisor)
The key element of ECG signal analysis is the detection of the QRS complex. The QRS complex is the most significant part of the signal. In this work, there is a short summary of methods used for QRS detection in real time. Based on previous research, the detection alghorithm is chosen and created in LabVIEW. The paper is also focused on cardiac arrhytmias. Created alghorithm is used for detecion certain types of arrhytmia. Alghorithm was tested on MIT/BIH arrhytmia database.
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Optimization methods for perfusion parameters estimation.
Bali-Jenčíková, Kateřina ; Kozumplík, Jiří (referee) ; Mézl, Martin (advisor)
The content of this bachelor thesis is research the principles of ultrasound imaging, description of mathematical models that are used to estimate perfusion parameters of concentration curves. Thesis also includes a theoretical analysis of genetic algorithms. In the practical part, solves the realization of global optimization methods and their subsequent evaluation. Implementation was solved by in Matlab.
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Finger vein biometrics
Bělehrádek, Stanislav ; Sekora, Jiří (referee) ; Mézl, Martin (advisor)
This thesis presents basic concepts in the field of biometrics, with a focus on optical methods of finger vein biometrics. The paper also contains additional information including physics and anatomy terms, which are important for understanding presented problems. Part of the thesis is draft of the device used for finger vein biometry and proposal of effective image preprocessing process for biometric purpose. Main part of the thesis contains creation and testing of such device. User interface is created in MATLAB and allows identification and verification of people with record in database. Biometric system is tested on group of 16 individuals. Achieved results are discussed and compared with results of similar devices.
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Software image processing of infrared thermograms of the lower limbs of diabetic patients
Langerová, Jana ; Mézl, Martin (referee) ; Bernard, Vladan (advisor)
This work deals with the automatic processing of the thermal images of the soles of the lower limbs. It contains general research in the topic of diabetic foot syndrome and general description of diabetes mellitus. It also deals with the theoretical area of the infrared radiation used in thermovision techniques and image processing techniques. In the second part, there is practically described the proposition of the software and then also its realization and commissioning. Created software contains two main possibilities for cropping the searching sole, the first one is completely manual detection and the second one is automatic with manual correction. In this work, there are also described all the procedures for reaching of the temperature analyzes. Last part of this work is dedicated to statical valorization of the information, which was got by the created software and which is conceived generally and serves to functional valorization of the created software.
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