|
|
Study of organosilicone fragmentation in plasma
Sahánková, Hana ; Studýnka, Jan (referee) ; Krčma, František (advisor)
This Bachelor Thesis deals on the study of organosilicone monomers in plasma. The dimethylphenylsilane (DMPS) was chosen as the organosilicone example. The theoretical part gives basic overview of plasmachemical processes and technologies used in present world. Some part is reserved for the description of plasma diagnostic basic methods as optical emission spectroscopy and mass spectroscopy. The experimental part is constituted from two different experiments. The first one was done as model experiment of DMPS fragmentation by electron beam of exact energy and it was completed at Faculty of Mathematics, Physics and Informatics in Bratislava. Results of these experiments brought a set of electron energies needed for the creation of various ionic fragments from the original molecule as well as the cross sections for their creation. The second part of the experiments was carried out under the inductively coupled RF low pressure plasma conditions during the deposition of DMPS based thin films. The plasma was monitored by optical emission spectroscopy at different discharge power. Various species were identified in the spectra. The calculation of plasma parameters and their comparision with the model experiment data will be subjects of the further work.
|
|
|
Diagnostics of thin layer deposition using tetravinylsilane monomer
Flamíková, Kristýna ; Dvořák,, Pavel (referee) ; Krčma, František (advisor)
The aim of this work is plasma diagnostic during the deposition of thin films based on organosilicone compounds. These layers have a wide range of applications mainly as protective coatings or intermediate phase in composites reinforced by glass fibers. The theoretical part of this work gives a basic fundaments of optical emission spectroscopy and mass spectroscopy and describes procedures for rotational, vibrational, and electron temperature calculations. The RF capacitive coupled discharge in configuration with planar electrodes was used with tetravinylsilane (TVS) organosilicone monomer in this study. The optical emission spectroscopy and mass spectroscopy were applied for the plasma diagnostics. The deposition process was carried out in continuous regime with applied power of 20, 25, 40, 50, 60, and 70 W, some experiments were done also in pulsed regime with duty cycle 1:1, 1:4 and 1:9 at fixed power of 50 W and 10 W when discharge was on. The atomic lines of hydrogen Balmer series and many rotational lines of molecular hydrogen were identified in the spectra. Besides them, the molecular bands of SiH, CH and C2 species were observed. The rotational temperature calculated from 0-0 CH band was in the range of 600 – 1000 K depending on the discharge conditions. The electron temperature in the range of 3600-7500 K was calculated from hydrogen atomic lines. In situ mass spectra collected simultaneously with optical emission spectra showed TVS monomer fragmentation increase with the increase of applied power in continuous regime. This result well correlated with OES in case of CH radical and hydrogen species, the other particles were mainly non-measurable by emission spectroscopy. The same results were also obtained with respect to the duty cycle parameter. The presented results clearly demonstrated the increase of monomer fragmentation with the increase of mean applied discharge power. Determination of prepared layer properties is a subject of other works and their relation to the plasma parameters will be a subject of further studies.
|
|
|
Identification of new tissue-specific interaction partners of chromatin remodelling ATPase Smarca5
Arishaka, Yuliia ; Kokavec, Juraj (advisor) ; Děd, Lukáš (referee)
The regulation of chromatin structure is fundamental to a wide range of cellular processes, including transcriptional regulation, cell division, differentiation and DNA damage repair, and ATP-dependent chromatin remodeling complexes have been established as essential components of this regulatory network. Smarca5, as an ATPase/Helicase enzyme, has been shown to regulate chromatin structure by interacting with bromodomain and DDT-WHIM domain-containing partners to control the binding of chromatin-associated proteins and transcription factors to their specific DNA target sequences. In this work we identify a previously undescribed protein with a conserved N-terminal bromodomain and ISWI protein binding DDT-WHIM domain through co-immunoprecipitation and mass spectrometry in mammalian cell lines and establish it as a novel interaction partner of chromatin remodeling ATPase Smarca5. Furthermore, we have pinpointed the region required for Smarca5 interaction that corresponds to DDT-WHIM domain. We have furthermore attempted to identify additional interaction partners which may hint on the potential function of this novel chromatin complex and validated its expression in embryonic and postnatal tissues. This discovery represents a unique opportunity for further investigation into its potential function in...
|
|
|
Alternative synthesis of of 1-(diphenylphosphino)-1'-(N,N-dimethylaminomethyl)ferrocene
Zábranský, Martin ; Štěpnička, Petr (advisor) ; Vojtíšek, Pavel (referee)
An alternative, more straightforward and effective method for the preparation of 1- (diphenylphosphino)-1'-(N,N-dimethylaminomethyl)ferrocene was developed using 1-bromo- 1'-(diphenylphosphino)ferrocene as the starting material and Eschenmoser's salt as an aminomethylation agent. Purity of thus prepared phosphinoamine was verified by 1 H and 31 P NMR spectroscopy and by comparison of the data with those reported in the literature (M. E. Wright, Organometallics, 1990, 9, 853). The coordination chemistry of this compound was investigated in gold(I) complexes. Thus, chlorido[1-(diphenylphosphino)-1'-(N,N-dimethyl- aminomethyl)ferrocene]gold(I) complex was synthesized and converted to ill-defined [1- (diphenylphosphino)-1'-(N,N-dimethylaminomethyl)ferrocene]gold(I) perchlorate by halogen abstraction with AgClO4. Protonization of the nitrogen atom in both compounds with hydrogen chloride yielded the corresponding hydrochlorides. It was shown that 1- (diphenylphosphino)-1'-(N,N-dimethylaminomethyl)ferrocene is coordinated as a simple phosphine in the resulting complexes while its amine nitrogen is protonated. All these complexes were characterized by means of 1 H, 31 P and 13 C NMR spectroscopy, mass spectroscopy with electrospray ionisation, elemental analysis and by single-crystal X-ray diffraction analysis.
|
|
|
Alternative synthesis of of 1-(diphenylphosphino)-1'-(N,N-dimethylaminomethyl)ferrocene
Zábranský, Martin ; Štěpnička, Petr (advisor) ; Vojtíšek, Pavel (referee)
An alternative, more straightforward and effective method for the preparation of 1- (diphenylphosphino)-1'-(N,N-dimethylaminomethyl)ferrocene was developed using 1-bromo- 1'-(diphenylphosphino)ferrocene as the starting material and Eschenmoser's salt as an aminomethylation agent. Purity of thus prepared phosphinoamine was verified by 1 H and 31 P NMR spectroscopy and by comparison of the data with those reported in the literature (M. E. Wright, Organometallics, 1990, 9, 853). The coordination chemistry of this compound was investigated in gold(I) complexes. Thus, chlorido[1-(diphenylphosphino)-1'-(N,N-dimethyl- aminomethyl)ferrocene]gold(I) complex was synthesized and converted to ill-defined [1- (diphenylphosphino)-1'-(N,N-dimethylaminomethyl)ferrocene]gold(I) perchlorate by halogen abstraction with AgClO4. Protonization of the nitrogen atom in both compounds with hydrogen chloride yielded the corresponding hydrochlorides. It was shown that 1- (diphenylphosphino)-1'-(N,N-dimethylaminomethyl)ferrocene is coordinated as a simple phosphine in the resulting complexes while its amine nitrogen is protonated. All these complexes were characterized by means of 1 H, 31 P and 13 C NMR spectroscopy, mass spectroscopy with electrospray ionisation, elemental analysis and by single-crystal X-ray diffraction analysis.
|
|
|
Diagnostics of thin layer deposition using tetravinylsilane monomer
Flamíková, Kristýna ; Dvořák,, Pavel (referee) ; Krčma, František (advisor)
The aim of this work is plasma diagnostic during the deposition of thin films based on organosilicone compounds. These layers have a wide range of applications mainly as protective coatings or intermediate phase in composites reinforced by glass fibers. The theoretical part of this work gives a basic fundaments of optical emission spectroscopy and mass spectroscopy and describes procedures for rotational, vibrational, and electron temperature calculations. The RF capacitive coupled discharge in configuration with planar electrodes was used with tetravinylsilane (TVS) organosilicone monomer in this study. The optical emission spectroscopy and mass spectroscopy were applied for the plasma diagnostics. The deposition process was carried out in continuous regime with applied power of 20, 25, 40, 50, 60, and 70 W, some experiments were done also in pulsed regime with duty cycle 1:1, 1:4 and 1:9 at fixed power of 50 W and 10 W when discharge was on. The atomic lines of hydrogen Balmer series and many rotational lines of molecular hydrogen were identified in the spectra. Besides them, the molecular bands of SiH, CH and C2 species were observed. The rotational temperature calculated from 0-0 CH band was in the range of 600 – 1000 K depending on the discharge conditions. The electron temperature in the range of 3600-7500 K was calculated from hydrogen atomic lines. In situ mass spectra collected simultaneously with optical emission spectra showed TVS monomer fragmentation increase with the increase of applied power in continuous regime. This result well correlated with OES in case of CH radical and hydrogen species, the other particles were mainly non-measurable by emission spectroscopy. The same results were also obtained with respect to the duty cycle parameter. The presented results clearly demonstrated the increase of monomer fragmentation with the increase of mean applied discharge power. Determination of prepared layer properties is a subject of other works and their relation to the plasma parameters will be a subject of further studies.
|
|
|
Study of organosilicone fragmentation in plasma
Sahánková, Hana ; Studýnka, Jan (referee) ; Krčma, František (advisor)
This Bachelor Thesis deals on the study of organosilicone monomers in plasma. The dimethylphenylsilane (DMPS) was chosen as the organosilicone example. The theoretical part gives basic overview of plasmachemical processes and technologies used in present world. Some part is reserved for the description of plasma diagnostic basic methods as optical emission spectroscopy and mass spectroscopy. The experimental part is constituted from two different experiments. The first one was done as model experiment of DMPS fragmentation by electron beam of exact energy and it was completed at Faculty of Mathematics, Physics and Informatics in Bratislava. Results of these experiments brought a set of electron energies needed for the creation of various ionic fragments from the original molecule as well as the cross sections for their creation. The second part of the experiments was carried out under the inductively coupled RF low pressure plasma conditions during the deposition of DMPS based thin films. The plasma was monitored by optical emission spectroscopy at different discharge power. Various species were identified in the spectra. The calculation of plasma parameters and their comparision with the model experiment data will be subjects of the further work.
|
guest ::
