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Raman tweezers for sorting of living cells
Pilát, Zdeněk ; Ježek, Jan ; Kaňka, Jan ; Šerý, Mojmír ; Jákl, Petr ; Zemánek, Pavel
We have developed an instrument for automatized analysis and sorting of living cells of unicellular algae and other micro-objects based on laser tweezers and Raman spectroscopy. The system comprises the Raman tweezers setup, special microfluidic chip, and a specialized software allowing image recognition, spectral analysis, and automated sorting functions. The resulting instrument allows non-destructive analysis of chemical properties of living cells and their automatic separation for further examination or cultivation.
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Raman tweezers: principle and applications
Bernatová, Silvie ; Samek, Ota ; Pilát, Zdeněk ; Ježek, Jan ; Kaňka, Jan ; Šiler, Martin ; Zemánek, Pavel
Raman tweezers combines the optical trap for non-contact micromanipulation of micro-objects with Raman spectroscopy for chemical analysis of the sample. This combination presents an efficient tool for concurrent spectroscopic analysis of chemical composition and micromanipulation allowing sorting or probing of mechanical properties of the sample. Raman tweezers were successfully used for example in characterization of biomolecules like DNA, for sorting of cells and investigation of the link between their chemical and mechanical properties.
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Growth of diamond thin films: a review
Kromka, Alexander ; Potocký, Štěpán ; Rezek, Bohuslav
Diamond is shown as an extraordinary material which offers promising solution for variety of fundamental studies and industrial uses. Here, growth of synthetic diamond films at low pressures (1 atm) and low temperatures (<1000°C) from carbon consisting gas mixtures is discussed. Variety of chemical vapor deposition techniques are reviewed, their advantages and disadvantages are pointed out too.
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Raman Microspectroscopy of Individual Algal Cells: Sensing Unsaturation of Storage Lipids in vivo
KOTAS, Petr
We have demonstrated the potential of Raman microspectroscopy for the fast and spatially resolved characterization of the composition of selected intracellular regions in individual living cells of three algal species. In particular, we have focused on lipid storage bodies and quantified the degree of unsaturation of algal lipids (iodine value). To verify our results, we developed a method for extraction of storage lipids from highly resistant Trachidiscus minutus cells and determined the fatty acid composition using GC/MS. We have found Raman microspectroscopy to be a fast, versatile, and virtually non-invasive tool for evaluating the potential of different algal species for algal lipid engineering and industry.
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GRAPHENE UNDER UNIAXIAL DEFORMATION: A RAMAN STUDY
Frank, Otakar ; Tsoukleri, G. ; Parthenios, J. ; Papagelis, K. ; Riaz, I. ; Jalil, R. ; Novoselov, K. S. ; Kalbáč, Martin ; Kavan, Ladislav ; Galiotis, C.
The presented work summarizes various aspects of uniaxial deformation in monolayer graphene studied by means of Raman spectroscopy. Graphene flakes were subjected to tension - compression uniaxial loading using the cantilever beam technique. The evolution of the Raman single-resonance (G) and double-resonance (2D) bands was monitored at strain levels < 1%. The position of all peaks redshifts under tension and blueshifts under compression. The G peak splitting into two sub-bands (G(-) and G(+)) which is caused by symmetry lowering, is observed in both strain directions. The sub-bands' intensities are used to calculate the crystal lattice orientation of the measured graphene flakes with respect to the strain axis. The nature and splitting of the 2D band even in the unstrained flakes, when excited by the 785 nm (1.58 eV) laser line, is interpreted as the interplay between two distinct double resonance scattering processes.
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Limitations of spectroscopic methods in the study of earthy pigments
Košařová, V. ; Hradil, David ; Kanický, V.
Nowadays, the spectroscopic methods, above all Infrared Spectroscopy (IR), are the most frequently used analytical methods in the research of cultural heritage, which is mainly caused by easy use and non-invasiveness of these methods and a broad range of their application, which comprises both organic and inorganic substances. Nevertheless, each analytical technique has its detection limits, and the fact that a particular method is suitable for one type of a sample does not automatically mean that it will be appropriate for the identification of another sample. Therefore, the aim of the study is to demonstrate the limitations of both Raman Spectroscopy (RS) and infrared spectroscopy in the study of earthy materials.
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Limitations of spectroscopic methods in the study of earthy pigments
Košařová, V. ; Hradil, David ; Kanický, V.
Nowadays, the spectroscopic methods, above all infrared spectroscopy (IR), are the most frequently used analytical methods in the research of cultural beritage, whitch is mainly cause by easy use and noninvasiveness of these metods and a broad range of thein application, which comprises both organic and inorganic substances. Therefore, the aim of the study is to demonstrate the limitations of both Raman Spectroscopy (RS) and infrared spectroscopy in the study of earthy materials.
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Structural analysis of extrinsic proteins from the oxygen-evolving complex of photosystem II from higher plants
KOHOUTOVÁ, Jaroslava
All life on earth depends mainly on the presence of oxygen. Largest producers of oxygen are green plants, cyanobacteria and algae. Oxygen is released from the oxygenevolving complex of photosystem II during photosynthesis and it is used in cellular respiration of all life complexes. The oxygen-evolving complex of photosystem II has the same function in each photosynthetic organism, but it has a different composition and organization of extrinsic proteins; only PsbO protein is ubiquitous in all known oxyphototrophs. Until now only low resolution electron microscopy structural models of plant PSII and crystal structures of cyanobacterial PSII are available. Higher plant extrinsic proteins (PsbP, PsbQ and PsbR) are structurally unrelated, non-homologues to the cyanobacterial extrinsic proteins (PsbO, PsbU and PsbV) and this is the reason why it is not possible to predict arrangement of these proteins on the lumenal site of higher plant PSII. Recently, models differ mainly in the structure of the oxygen-evolving complex, which could be resolved by determination of the exact binding sites for extrinsic proteins. An other question evolves: if the difference in the oxygen-evolving complex composition is the result of evolution or adaptation of photosynthetic organisms to their environment. Structural knowledge of extrinsic proteins that could help to resolve the location and subsequently the function of extrinsic proteins is still incomplete. From this case,structural analysis, interactions and probably arrangement of proteins PsbP and PsbQ was studied and is described in detail in this thesis.
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