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Factors limiting the distribution of the mycoheterotrophic plants in fragmented landscape
KOTILÍNEK, Milan
This thesis investigates the influence of habitat, dispersal abilities and evolution on distribution of mycoheterotrophic plants represented by six orchid species. Several methods including seed trapping, in situ seed germination, fungal barcoding, gene flow study and stable isotopes analyses were used to examine this topic. The final synthesis of these approaches shows lower limitation by dispersal abilities and stronger limitation by habitat.
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Studying the regulation of expression of genes involved in barley malting quality
Hoffmannová, Viktorie ; Svobodová, Leona (advisor) ; Lipavská, Helena (referee)
Barley (Hordeum vulgare L.) is a grain cultivated as an agricultural crop across many varying climatic areas of the world. It is mainly used for its feed and brewing industry properties. This work will focus on studying the malting process on a molecular level, which mainly includes the genes for degradative enzymes of storage proteins, starch and compounds of endosperm cell walls. We shall observe how all these components interact during malting and other processes of brewing beer. It is known that malting quality parameters are tied to several genes, whose expression is regulated. These regulatory pathways will also be included in this work.
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Germination requirements of rare and common plant species of Giant Mountains
Paulů, Andrea ; Münzbergová, Zuzana (advisor) ; Moravcová, Lenka (referee)
For a long time studies were focused on searching optimal conditions of germination of individual species. During the last few years studies have started to search for a relationship between germination and various species characteristics. Most of them, however, use only one temperature during germination tests. Very few studies use more than one temperature during the germination tests. In the last years studies started also to compare germination between rare and common species, but these studies compare just a few species. There are no studies which would compare germination on broader range of species. Aim of this study was to indentify which factors are determing germination of species and to find relationships between germination and characteristics of rare species (n=62). Another aim was to find out differences in germination of pairs (n=24) of closely related rare and common species. To test the germination I have chosen a methodology with several consecutive temperatures. Throughout the time of testing , the seeds were placed either in light or in dark. The dataset was processed by linear regression. The results show that germination requirements of species are determinet by time of flowering, weight of seeds, dispersal mode, species requirements for soil humidity and nutrients and type of...
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The effect of temperature on plant growth: teaching protocols of model experiments
Máhrlová, Zuzana ; Albrechtová, Jana (advisor) ; Mourek, Jan (referee)
This diploma thesis is focused on the creation of model tasks (by means of an experiment) for the study of biology at secondary schools and concerns the effects of temperature on plant growth. The selected tasks utilize the new didactic approach by means of the so called inquiry based education. This method of teaching contributes to the development of individual deduction reasoning and encourages the students to actively think about the subject matter. The thesis provides the necessary theoretical background for the topic together with the description of methods and material needed for the conducting the experiments. Furthermore, the thesis describes the necessary instructions and procedures to conduct the experiment and its use in the secondary school teaching practice and presents the requisite methodical guidelines and worksheets for them. Simultaneously, the thesis verifies the didactic applicability of the experiment and the worked out materials through a questionnaire survey and monitored application of the model tasks at secondary schools. The main result of this diploma thesis is a modern, functional and verified method of teaching for high school about the effects of temperature on plant growth in accordance with modern approaches to education, which include own experiments, their...
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Identification and modeling of gene expression regulatory networks during streptomycetes germination
Straková, Eva ; Vohradský, Jiří (advisor) ; Stopka, Pavel (referee) ; Vondrášek, Jiří (referee)
Streptomycetes have been studied mostly as producers of antibiotics and for fundamentals of complex bacterial cell development. Here, transcriptomic and proteomic approaches were applied to systems study of Streptomyces coelicolor germination as a developmental transition from dormancy to the vegetative stage. The time dynamics of the gene expression levels represented by mRNA and intracellular protein accumulation and synthesis were measured throughout 5.5 h of germination at 13 time points by employing both DNA microarray and two-dimensional gel electrophoresis techniques. Using a numerical model of gene expression, genetic networks were reconstructed and functional groups of genes controlled by the sigma factors were identified. Modeling of the regulatory interactions provided a set of parameters allowing simulate kinetics of gene expression control among the sigma factors and their target genes. Particularly regulons of two sigma factors, SigR and HrdD, were identified. The analysis assigned their key role during the germination process. Analysis of global trends in the gene/protein expression revealed that the full capability of regulatory mechanisms responding to the environmental cues is reached within the first hour of germination, and identified the basic gene/protein functional groups...
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Ecophysiological relevance of extreme sensitivity of orchids to nitrates
Figura, Tomáš ; Ponert, Jan (advisor) ; Tylová, Edita (referee)
Many orchid species are seriously endangered at present. Reasons for their disappearing from natural habitats remain often unclear. Orchids depend on mycorrhizal symbiosis in nature, however only little is known about this symbiosis. Seeds of some species do not germinate in vitro, making their cultivation for scientific and rescue purposes impossible. We found that seed germination of one of such reluctant species, Pseudorchis albida, is strongly inhibited by nitrates even at extremely low concentrations. As this species prefers oligotrophic mountain meadows, nitrate-induced inhibition probably take place in natural conditions. Surprisingly, we found similar but slightly weaker inhibitory effect also in typical mesophillic species and even in slightly eutrophic ones. The sensitivity to nitrates correlates with trophy level of species canopy. This inhibitory effect of nitrates could be weakened by application of a range of growth regulators, including auxins, cytokinins and gibberellins, and also by mycorrhizal fungi. The action of nitratereductase is essential for this inhibitory effect of nitrates. Experiments with NO donors, scavengers, and NO quantification are pointing right at NO as compound which perhaps mediates nitrate inhibitory effect. Based on these results, the nitrate inhibitory...
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The effect of soil successional development in spoil heap on plant germination and growth
Pavlíčková, Hana ; Frouz, Jan (advisor) ; Mudrák, Ondřej (referee)
Previous field research show, that late successional species correspond with soil development, especially with organomineral A horizon developing. Aim of my thesis was to compare plant growth on different types of soil from spoil heaps. They were taken from three chronosequencies of different age - nonrecultivated and soils recultivated with planting of alder (Alnus) and spruce (Picea). In my research were used 7 types of plants - Arrhenatherum elatius, Centaureae jacea, Festuca rubra, Lychnis flos-cuculi, Lotus corniculatus, Plantago major, Trifolium medium. Spontaneous sites support more species than reclaimed ones this difference increase with plot age without distinct difference between early and late succession species. Key words Succession, recultivation, germination alder (Alnus), spruce (Picea), Arrhenatherum, Centaureae, Festuca, Lychnis, Lotus, Plantago, Trifolium.
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Mechanisms that control physiological seed dormancy
Řezková, Natálie ; Ponert, Jan (advisor) ; Vosolsobě, Stanislav (referee)
Physiological dormancy is an important developmental trait ensuring that seed does not germinate when the environmental factors are appropriate only temporary. The transition from seed dormancy to germination is regulated by a large number of factors and the phytohormone abscisic acid (ABA) plays a crucial role. Enhanced response to ABA and its biosynthesis is a key mechanism in dormancy induction and maintenance. ABA interacts antagonistically with gibberellins (GAs). Therefore GA biosynthesis and ABA catabolism are positive germination regulators. However, other phytohormones are also involved in the regulation of dormancy and germination. The most studied is ethylene which supports germination similarly to GA. Numerous factors affect dormancy at molecular level, namely chromatin remodeling, gene products that function only in dormancy regulation [e.g. DELAY OF GERMINATION 1 (DOG1)] or gene products that mediate seed response to environmental factors. The dormancy, its induction, depth and release, is driven not only by environmental conditions affecting mature seeds, but also by conditions acting during seed maturation in a maternal plant when the primary dormancy is induced. Requirements for dormancy release and germination induction may vary considerably between species. The physiological...
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Structure and function of the invasion apparatus of microsporidia
Dohnálek, Vít ; Doležal, Pavel (advisor) ; Vávra, Jiří (referee)
Microsporidia are obligate intracellular parasites that cause significant economic damage and can infect humans. They had evolved highly specialized invasion apparatus that is unique to them. During the invasion the sporoplasm is released from the spore wall and it is transferred to the host cytoplasm through the polar tube. Current research on the invasion apparatus has been focused mainly on the polar tube that is its most prominent structure. Polaroplast and posterior vacuole remain out of the main interest, although they are necessary for the activation and execution of the invasion. If the right combination of environmental factors occurs, the organization of the polaroplast begins to change, the posterior vacuole starts to swell and the polar tube is discharged. Sporoplasm is eventually pushed through the tube into the host cell by growing posterior vacuole. The mechanism has not been explained yet however plenty of theories are trying to explain the germination. This work summarizes current theories and knowledge of structure and function of particular parts of the invasion apparatus. Key words: Microsporidia, invasion, polar tube, intracellular parasitism, germination
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