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National Repository of Grey Literature 2 records found  Search took 0.00 seconds. 
Classification of Small Noncoding RNAs
 Žigárdi, Tomáš ; Martínek, Tomáš (referee) ; Vogel, Ivan (advisor)
This masters's thesis contains description of designed and implemented tool for classification of plant microRNA without genome. Properties of mature and star sequences in microRNA duplexes are used. Implemented method is based on clustering of RNA sequences (with CD-HIT) to mainly reduce their count. Selected representants from each clusters are classified using support vector machine. Performance of classification is more than 96% (based on cross-validation method using the training data).
Detailed record
Classification of Small Noncoding RNAs
 Žigárdi, Tomáš ; Martínek, Tomáš (referee) ; Vogel, Ivan (advisor)
This masters's thesis contains description of designed and implemented tool for classification of plant microRNA without genome. Properties of mature and star sequences in microRNA duplexes are used. Implemented method is based on clustering of RNA sequences (with CD-HIT) to mainly reduce their count. Selected representants from each clusters are classified using support vector machine. Performance of classification is more than 96% (based on cross-validation method using the training data).
Detailed record

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