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National Repository of Grey Literature 2 records found  Search took 0.00 seconds. 
Acceleration of Algorithms for Approximate String Matching Using FPGA
 Beck, Patrik ; Kořenek, Jan (referee) ; Martínek, Tomáš (advisor)
This work describes implementation of hardware device for approximate string matching of biological sequences. Matchnig is performed using Smith-Waterman and Needleman-Wunsch algorithms. Device can be used as an accelerator for bioinformatics algorithms on higher level. This accelerator can be used for human genome analysis, matching proteins against a database, revealing inheritance information. Depending on task character, the acceleration speed up achieves several orders of magniture in comparison with conventional computers.
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Acceleration of Algorithms for Approximate String Matching Using FPGA
 Beck, Patrik ; Kořenek, Jan (referee) ; Martínek, Tomáš (advisor)
This work describes implementation of hardware device for approximate string matching of biological sequences. Matchnig is performed using Smith-Waterman and Needleman-Wunsch algorithms. Device can be used as an accelerator for bioinformatics algorithms on higher level. This accelerator can be used for human genome analysis, matching proteins against a database, revealing inheritance information. Depending on task character, the acceleration speed up achieves several orders of magniture in comparison with conventional computers.
Detailed record

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