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Genome size studies in plants - from intraspecific variation to ecological consequences
Lučanová, Magdalena ; Trávníček, Pavel (advisor) ; Leitch, Ilia (referee) ; Šmarda, Petr (referee)
Nuclear DNA content (genome size) is one of the basic characteristics of living organisms. In the Angiosperms, the range of genome size is 2,300-fold, which raises questions about the causes and consequences of this tremendous variation. This thesis deals with genome size in plants from the level of intraspecific homoploid variation, through intraspecific ploidy variation, to interspecies comparisons. On various study systems we investigated the dynamics and ranges of genome size variation, tried to reveal possible associations between genome size and selected biological traits, and assessed the extent to which differences in genome size are manifested at the ecological and evolutionary level. As a means of estimating genome size we applied flow cytometry (FCM). In Taraxacum stenocephalum we conducted a detailed study of its enormous genome size variation. We carried out crossings of parents with various genome sizes and compared these parental genome sizes with those of F1 offspring. We also attempted to reveal the association of genome size with various growth traits. In Galium valdepilosum and Arabidopsis arenosa we carried out an extensive flow-cytometric ploidy level screening and compared the distribution and ecological preferences of detected cytotypes. We studied the Andean genus...
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Evolution of Vicia cracca L. - distribution of cytotypes, their genetic variation and growth traits
Eliášová, Anežka ; Münzbergová, Zuzana (advisor) ; Vallejo-Marin, Mario (referee) ; Vašut, Radim Jan (referee)
A lot of the research has been made in the field of plant polyploidy since the discovery of this phenomenon. However, the more we know, the more questions arise. Overall, the most insistent questions remain: How did the polyploids arise and become established? Is it advantageous to be polyploid? We chose a perennial herb Vicia cracca L. to study the causes and consequences of polyploidisation on microevolution of a diploid-tetraploid complex in central European conditions. First, evidence from both flow cytometry and molecular markers (allozymes, DNA sequences, microsatellites) confirmed a hypothesised autopolyploid origin of tetraploids. Based on allozymes, we proved that tetraploids are genetically richer than diploid ancestors. However, we showed that the conclusions depend on statistics used for genetic variation measurements. Nevertheless, tetraploids of V. cracca suffered lesser reduction in seed production after artificial selfing than diploids. We thus infer that they profit from multiple allele dosage, which can mask deleterious alleles. We also corroborated an existence of a central European contact zone of diploids and tetraploids and discovered two other contact zones in south-western and south- eastern Europe. The central European contact zone with several mixed-ploidy populations served us as...
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Genome size studies in plants - from intraspecific variation to ecological consequences
Lučanová, Magdalena
Nuclear DNA content (genome size) is one of the basic characteristics of living organisms. In the Angiosperms, the range of genome size is 2,300-fold, which raises questions about the causes and consequences of this tremendous variation. This thesis deals with genome size in plants from the level of intraspecific homoploid variation, through intraspecific ploidy variation, to interspecies comparisons. On various study systems we investigated the dynamics and ranges of genome size variation, tried to reveal possible associations between genome size and selected biological traits, and assessed the extent to which differences in genome size are manifested at the ecological and evolutionary level. As a means of estimating genome size we applied flow cytometry (FCM). In Taraxacum stenocephalum we conducted a detailed study of its enormous genome size variation. We carried out crossings of parents with various genome sizes and compared these parental genome sizes with those of F1 offspring. We also attempted to reveal the association of genome size with various growth traits. In Galium valdepilosum and Arabidopsis arenosa we carried out an extensive flow-cytometric ploidy level screening and compared the distribution and ecological preferences of detected cytotypes. We studied the Andean genus...
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Genome size studies in plants - from intraspecific variation to ecological consequences
Lučanová, Magdalena
Nuclear DNA content (genome size) is one of the basic characteristics of living organisms. In the Angiosperms, the range of genome size is 2,300-fold, which raises questions about the causes and consequences of this tremendous variation. This thesis deals with genome size in plants from the level of intraspecific homoploid variation, through intraspecific ploidy variation, to interspecies comparisons. On various study systems we investigated the dynamics and ranges of genome size variation, tried to reveal possible associations between genome size and selected biological traits, and assessed the extent to which differences in genome size are manifested at the ecological and evolutionary level. As a means of estimating genome size we applied flow cytometry (FCM). In Taraxacum stenocephalum we conducted a detailed study of its enormous genome size variation. We carried out crossings of parents with various genome sizes and compared these parental genome sizes with those of F1 offspring. We also attempted to reveal the association of genome size with various growth traits. In Galium valdepilosum and Arabidopsis arenosa we carried out an extensive flow-cytometric ploidy level screening and compared the distribution and ecological preferences of detected cytotypes. We studied the Andean genus...
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Genome size studies in plants - from intraspecific variation to ecological consequences
Lučanová, Magdalena ; Trávníček, Pavel (advisor) ; Leitch, Ilia (referee) ; Šmarda, Petr (referee)
Nuclear DNA content (genome size) is one of the basic characteristics of living organisms. In the Angiosperms, the range of genome size is 2,300-fold, which raises questions about the causes and consequences of this tremendous variation. This thesis deals with genome size in plants from the level of intraspecific homoploid variation, through intraspecific ploidy variation, to interspecies comparisons. On various study systems we investigated the dynamics and ranges of genome size variation, tried to reveal possible associations between genome size and selected biological traits, and assessed the extent to which differences in genome size are manifested at the ecological and evolutionary level. As a means of estimating genome size we applied flow cytometry (FCM). In Taraxacum stenocephalum we conducted a detailed study of its enormous genome size variation. We carried out crossings of parents with various genome sizes and compared these parental genome sizes with those of F1 offspring. We also attempted to reveal the association of genome size with various growth traits. In Galium valdepilosum and Arabidopsis arenosa we carried out an extensive flow-cytometric ploidy level screening and compared the distribution and ecological preferences of detected cytotypes. We studied the Andean genus...
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Evolution of Vicia cracca L. - distribution of cytotypes, their genetic variation and growth traits
Eliášová, Anežka ; Münzbergová, Zuzana (advisor) ; Vallejo-Marin, Mario (referee) ; Vašut, Radim Jan (referee)
A lot of the research has been made in the field of plant polyploidy since the discovery of this phenomenon. However, the more we know, the more questions arise. Overall, the most insistent questions remain: How did the polyploids arise and become established? Is it advantageous to be polyploid? We chose a perennial herb Vicia cracca L. to study the causes and consequences of polyploidisation on microevolution of a diploid-tetraploid complex in central European conditions. First, evidence from both flow cytometry and molecular markers (allozymes, DNA sequences, microsatellites) confirmed a hypothesised autopolyploid origin of tetraploids. Based on allozymes, we proved that tetraploids are genetically richer than diploid ancestors. However, we showed that the conclusions depend on statistics used for genetic variation measurements. Nevertheless, tetraploids of V. cracca suffered lesser reduction in seed production after artificial selfing than diploids. We thus infer that they profit from multiple allele dosage, which can mask deleterious alleles. We also corroborated an existence of a central European contact zone of diploids and tetraploids and discovered two other contact zones in south-western and south- eastern Europe. The central European contact zone with several mixed-ploidy populations served us as...
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Population cytotype structure and phenotypic variation of Campanula moravica
Šemberová, Kristýna ; Suda, Jan (advisor) ; Mráz, Patrik (referee)
Polyploidisation plays a major role in plant evolution. It can also cause taxonomic complexities as morphological differences are often blurred in higher ploidy levels. One of the taxonomically-intrigued groups of Central Europe is C. rotundifolia agg. Three ploidy- heterogeneous species are traditionally recognized in the Czech Republic: C. gentilis (2x, 4x), C. rotundifolia (2x, 4x) and C. moravica (4x, 6x). The thesis examines karyological and phenotypic variation of C. moravica, in the centre of its distribution (the Czech Republic and Slovakia). With the aid of modern biosystematics tools (DNA flow cytometry, multivariate morphometrics), marked discrepancies were revealed between published data and actual cytotype distribution pattern and morphological variation. In contrast to literature records, cytotype distribution in C. moravica is largely parapatric, with hexaploids occurring in Pannonian basin and tetraploids in Central and Eastern Slovakia. The type population of presumed tetraploids turned out to be hexaploid. The coexistence of one majority (4x) and six minority cytotypes (2x, 3x, 5x, 6x, 8x, 9x) was found in one population in central Slovakia and represent the most salient case of ploidy coexistence ever reported. Multivariate morphometrics showed that species identification on the...
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Polyploid speciation of the genus Anthoxanthum in Europe
Khodlová, Zuzana ; Trávníček, Pavel (advisor) ; Štech, Milan (referee)
Eight of fifteen species in genus Anthoxanthum (Poaceae) can be found in Europe. Five of them are perennials forming A. odoratum complex, the remaining three are annual, more or less mediterranean taxa (A. aristatum, A. ovatum and A. gracile). Within the A. odoratum s. l. complex the following taxa are distinguished: widely spread A. odoratum s. str. (4x; 2n = 20), arcto-alpine A. alpinum (2x a 4x; 2n = 10 and 20), Madeiran endemic species A. maderense (2x; 2n = 10), endemic species of Balkan mountains A. pauciflorum (2x; 2n = 10) and the Iberian peninsula endemic A. amarum (?x; 2n ~ 90). The aim of this thesis is to clearify the unknown evolutionary relationships between the taxa, between the annuals and perennials, diploids and polyploids. The following questions should be answered in this study: 1) What is the origin and distribution of the rediscovered diploid perennial taxon and what is its relationship to the other members of the group; 2) What is the distribution pattern of the perennial taxa of the genus Anthoxanthum in Europe and what is their haplotype differenciation (overall distribution of the taxa and haplotypes and the existence of their sympatric occurence); 3) What evolutionary ties exist among the species and what is the origin of allotetraploid taxon A. odoratum s.str. The...
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