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Diversity of ciliates of the family Nyctotheridae in cockroaches
Soviš, Matyáš ; Čepička, Ivan (advisor) ; Škaloud, Pavel (referee)
Cockroaches are tremendously interesting group of insects with broad morphological diversity and a wide range of lifestyles. They are known to host a plethora of fascinating protists ranging from excavate flagellates through gregarines and amoebozoans to extraordinary ciliates of the group Armophorea. There is however, in contrast to the flagellates, only scarce information on these intestinal ciliates. The available data are mostly only morphological and there is a limited information on their host specificity. Therefore, we chose to inspect the diversity of ciliates in cockroaches, both in the stock cultures of Department of Zoology on Charles University as well as in those collected in nature. We studied their presence in various cockroach lineages, obtained 18S rRNA gene sequence data, and assessed their phylogenetic relationships. We also performed protargol staining of the cells to characterize the morphology of individual lineages.
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Karyotype variability of harvestmen from Nemastomatidae family (Arachnida: Opiliones)
Alaverdyan, Argam ; Šťáhlavský, František (advisor) ; Symonová, Radka (referee)
This master's thesis is focused on cytogenetic analysis and karyotype variability of the Nemastomatidae family. This family comprises morphologically uniform harvestmen of small sizes, with low mobility, and with center of distribution in Europe. Karyotype differences could play an important role for detection of cryptic diversity in this family. The karyotype analysis is focused mainly on Alpine and Pyrenean endemic species but also on other taxons located in Central Europe. The goal was not only to identify the differences which occur between the specific genera and species, but also eventually between populations. For detection of the specific chromosomal alterations in evolution of the karyotype in Nemastomatidae the fluorescent in situ hybridization (FISH) was used, localizing the positions and amounts of gene clusters for 18S rRNA. From the results we can assume that the number of chromosomes in the family Nemastomatidae can range between 2n = 12- 30. Further it was found out that in Nemastomatidae the biarmed chromosomes are more prevalent, and that the species which have lower amounts of chromosomes contain chromosomes that noticeably differ in size (probably because of chromosomal fusions). These results indicate that with some morphologically uniform species, the knowledge of specific...
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The diversity of algae from red snow in Europe: combination of molecular and morphological data
Křížková, Heda ; Nedbalová, Linda (advisor) ; Šabacká, Marie (referee)
We can find a lot of microorganisms living in snow including psychrophilic snow algae from the order Chlamydomonadales (Chlorophyta). They are adapted to the extreme conditions in this habitat and can cause the phenomenon of coloured snow. The species Chlamydomonas nivalis (Bauer) Wille is the most commonly associated with red snow in alpine and polar regions during summer season worldwide. In the field material, we can find red spherical cells without flagella and any morphological characteristics suitable for species determination. Until now, this species has not been isolated into laboratory culture and its life cycle is unclear. Furthermore it has been shown that red coloured snow can be caused by more species which used to be determined as Chlamydomonas nivalis. The aim of this study was to collect samples of red snow from different parts of Europe, to describe the morphological variability of Chlamydomonas nivalis-like snow algae in relation to region of origin, to try to isolate laboratory strain of this species and to describe its position and distribution by phylogenetic analysis of laboratory strains and field samples. Red snow samples were collected from 30 European localities in Slovenian Alps, Romania, Dolomites, Ötztal, Wallis and Sarntal Alps, High Tauern, Ortler massif, in Norway,...
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Taxonomic position, phylogenetic relationships and metal resistance of green algae dominating in phytoplankton of two acid lakes
Barcyte, Dovile ; Nedbalová, Linda (advisor) ; Hašler, Petr (referee)
The aim of this diploma thesis was to reveal the taxonomic position and phylogenetic relationships of the dominant planktonic algae in two acid metal-rich lakes (Hromnice Lake and Plešné Lake, Czech Republic) and to compare these isolates with other closely related strains with the focus on the tolerance to various toxic metals (Cr, Al, Cu, Mn, Zn, Hg). The phylogenetic analyses showed that both strains belong to species Coccomyxa simplex. It was the first evidence that specifically this species is capable to become the dominant phytoplankton alga in the extreme environment of acid lakes with increased supply of phosphorus. Based on 18S rDNA analysis, four independent phylogenetic lineages were revealed within the genus Coccomyxa with three of them containing isolates from acid freshwaters. Furthermore, new strains of the recently described species Coccomyxa polymorpha were found growing in various chemical solutions. The toxicity test revealed that Coccomyxa simplex strains isolated from Hromnice and Plešné lakes did not show any peculiar resistance to increased metal concentrations. A significantly strain-specific response was recorded in case of aluminum, however, it was not related to the concentration of this metal in the original habitat. The ability to thrive in extreme habitats is probably...
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Blood parasites of fish from Svalbard
POSPÍŠILOVÁ, Iva
This thesis reviews knowledge about diversity of blood parasites of fish. Blood smears of fish used in this study were obtained in Billefjorden (Svalbard archipelago, Arctic). Desseria myoxocephali, the type species of Desseria, is the only one parasite that was found in the smears. A partial 18S rDNA sequence of D. myoxocephali was prepared and phylogenetic analyses were computed. D. myoxocephali forms a lineage together with Dactylosoma ranarum and Babesiosoma stableri within adeleorinid clade.
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Molecular identification and phylogeny of \kur{Chlorella} spp. production strains utilized in algal biotechnologies
VODIČKA, Tomáš
Green algae are quite important primary producers in fresh waters. The genus Chlorella represents one of algae most frequently utilized in algal biotechnologies to produce biomass, using either autotrophic or heterotrophic cultivation systems. It is than exploited as a food supplement for humans or animals. However, particular species within the genus are morphologically indistinguishable and molecular markers should be used to characterize production strains. This work is aimed to molecularly characterize three production strains of Chlorella for patent protection purposes and to specify their phylogenetic and taxonomic position.
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