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Karyotype evolution of selected families of entelegyne spiders
Kotz, Matěj ; Král, Jiří (advisor) ; Nguyen, Petr (referee)
The Araneoidea superfamily is a diverse clade of spiders with a great species diversity. The whole superfamily displays considerable conservativeness of observed karyotypes. Most likely ancestral karyotype in males is 24 acrocentric chromosomes with X1X2 sex determination system. The goal of this study is to explore the karyotype diversity of two araneoid families - Araneidae and Mimetidae. The majority of studied species exhibit the ancestral karyotype. In some species of the aformentioned families was observed sudden increase in chromosome numbers, up to 2n♂ = 52 in Araneidae and up to 2n♂ = 57 in Mimetidae. The latter number is the highest chromosome count observed in Entelegynae so far. Increase in 2n goes hand in hand with increase in sex chromosome numbers, leading up to X1X2X3X40 system in Araneidae and up to X1X2X3X4X5X6X70 in Mimetidae. I suggest polyploidy as a possible mechanism of the increase. To test this hypothesis, I measured the size of the genome using flow cytometry and used fluorescence in situ hybridization for the detection of 18S rRNA and 5S rRNA genes. For one species, probe for U2 snRNA gene was also optimized as part of this thesis. In many species studied, these techniques were used for the first time ever. In the case of the family Mimetidae, the largest genomes in...
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Centric fusions in karyotype evolution of spiders
Mlnáříková, Barbora ; Forman, Martin (advisor) ; Nguyen, Petr (referee)
Entelegynae are the most specious group of spiders. Their karyotypes are characterized by the predominance of X1X20 sex chromosome system and exclusively acrocentric morphology of chromosomes. Mono-armed chromosomes can be the substrate for centric fusion, the rearrangement, in which two acrocentric chromosomes fuse at their centromeric regions and form single bi-armed chromosome. In Entelegynae, centric fusion events followed the "all or nothing" rule, where all acrocentric chromosomes fuse during one event or in a very rapid sequence and karyotype is fully saturated by bi-armed chromosomes. Although the cytogenetics of Entelegynae is relatively well studied, so far, "all or nothing" phenomenon has been observed only rarely, namely in 12 species from 5 families. In this thesis, new data about the occurrence of centric fusion in 12 species from 5 unrelated families are reported. In all cases the "all or nothing" rule was confirmed. Strong female meiotic drive is proposed as the main force responsible for changes in chromosomal morphology of Entelegynae. The persisting of bi-armed chromosomes is likely to be rare in Entelegynae. However, in the family Dictynidae, bi-armed chromosomes are fixed. For a better understanding of karyotype dynamics in this unique family, molecular cytogenetic approaches...
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Karyotype evolution of African clades of theraphosid mygalomorphs
Košátko, Prokop ; Král, Jiří (advisor) ; Nguyen, Petr (referee)
Karyotypes of mygalomorph spiders are not satisfactorily known. This thesis is focused on the basic cytogenetic analysis of selected species of African clades of theraphosid mygalomorphs. It includes four subfamilies: Eumenophorinae, Harpactirinae, Ischnocolinae and Stromatopelminae. Diploid numbers, chromosome morphology, sex chromosome systems and chromosome behaviour in male germline in the selected species of African theraphosid subfamilies were studied. The findings support published results, that refer of high karyotype diversity in Theraphosidae. Diploid chromosome number reduction is probably a basic trend of theraphosid karyotype evolution. The majority of analysed species exhibited one, two or three sex chromosomes. In some species neo-sex chromosome systems were found. In some species one or two sex chromosome pairs (SCP), composed of chromosomes which lack morphological differentiation were detected. Nucleolus organizer regions were detected by fluorescent in situ hybridization in several species. Constitutive heterochromatin detection was performed by C-banding in two species. Keywords: constitutive heterochromatin, diploid number, karyotype, fluorescence in situ hybridization, Mygalomorphae, nucleolus organizer region, SCP, sex chromosome, spider, Theraphosidae
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Karyotype evolution of Oxyhaloinae cockroaches
Jankásek, Marek ; Šťáhlavský, František (advisor) ; Nguyen, Petr (referee)
Cockroaches of Afrotropical subfamily Oxyhaloinae (Blattodea: Blaberidae) are widely known due to the popularity of Madagascar hissing cockroaches as pet species. It is thus surprising that evolutionary relationships and cytogenetical characteristics of this group haven't been studied in detail yet. The first molecular-phylogenetic analysis focused exclusively on Oxyhaloinae and based on 29 samples representing 24 species is provided herein. Karyotypes of 12 species that have never been cytogenetically studied before are described and additional karyotype information for 4 species with known chromosome number is provided. Moreover, intraspecific chromosome number polymorphism was observed in two species. The first application of molecular-cytogenetic methods within Blattodea in form of fluorescent in situ hybridization using 18S rDNA probe is performed in 16 species. Intraspecific 18S rDNA loci number variation was observed in four species. All cytogenetic characteristics are discussed in the context of obtained phylogenetic hypothesis and put in a frame of recent knowledge.
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Karyotype evolution of selected families of entelegyne spiders
Kotz, Matěj ; Král, Jiří (advisor) ; Nguyen, Petr (referee)
The Araneoidea superfamily is a diverse clade of spiders with a great species diversity. The whole superfamily displays considerable conservativeness of observed karyotypes. Most likely ancestral karyotype in males is 24 acrocentric chromosomes with X1X2 sex determination system. The goal of this study is to explore the karyotype diversity of two araneoid families - Araneidae and Mimetidae. The majority of studied species exhibit the ancestral karyotype. In some species of the aformentioned families was observed sudden increase in chromosome numbers, up to 2n♂ = 52 in Araneidae and up to 2n♂ = 57 in Mimetidae. The latter number is the highest chromosome count observed in Entelegynae so far. Increase in 2n goes hand in hand with increase in sex chromosome numbers, leading up to X1X2X3X40 system in Araneidae and up to X1X2X3X4X5X6X70 in Mimetidae. I suggest polyploidy as a possible mechanism of the increase. To test this hypothesis, I measured the size of the genome using flow cytometry and used fluorescence in situ hybridization for the detection of 18S rRNA and 5S rRNA genes. For one species, probe for U2 snRNA gene was also optimized as part of this thesis. In many species studied, these techniques were used for the first time ever. In the case of the family Mimetidae, the largest genomes in...
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Karyotype evolution of African clades of theraphosid mygalomorphs
Košátko, Prokop ; Král, Jiří (advisor) ; Nguyen, Petr (referee)
Karyotypes of mygalomorph spiders are not satisfactorily known. This thesis is focused on the basic cytogenetic analysis of selected species of African clades of theraphosid mygalomorphs. It includes four subfamilies: Eumenophorinae, Harpactirinae, Ischnocolinae and Stromatopelminae. Diploid numbers, chromosome morphology, sex chromosome systems and chromosome behaviour in male germline in the selected species of African theraphosid subfamilies were studied. The findings support published results, that refer of high karyotype diversity in Theraphosidae. Diploid chromosome number reduction is probably a basic trend of theraphosid karyotype evolution. The majority of analysed species exhibited one, two or three sex chromosomes. In some species neo-sex chromosome systems were found. In some species one or two sex chromosome pairs (SCP), composed of chromosomes which lack morphological differentiation were detected. Nucleolus organizer regions were detected by fluorescent in situ hybridization in several species. Constitutive heterochromatin detection was performed by C-banding in two species. Keywords: constitutive heterochromatin, diploid number, karyotype, fluorescence in situ hybridization, Mygalomorphae, nucleolus organizer region, SCP, sex chromosome, spider, Theraphosidae
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Karyotype evolution of Oxyhaloinae cockroaches
Jankásek, Marek ; Šťáhlavský, František (advisor) ; Nguyen, Petr (referee)
Cockroaches of Afrotropical subfamily Oxyhaloinae (Blattodea: Blaberidae) are widely known due to the popularity of Madagascar hissing cockroaches as pet species. It is thus surprising that evolutionary relationships and cytogenetical characteristics of this group haven't been studied in detail yet. The first molecular-phylogenetic analysis focused exclusively on Oxyhaloinae and based on 29 samples representing 24 species is provided herein. Karyotypes of 12 species that have never been cytogenetically studied before are described and additional karyotype information for 4 species with known chromosome number is provided. Moreover, intraspecific chromosome number polymorphism was observed in two species. The first application of molecular-cytogenetic methods within Blattodea in form of fluorescent in situ hybridization using 18S rDNA probe is performed in 16 species. Intraspecific 18S rDNA loci number variation was observed in four species. All cytogenetic characteristics are discussed in the context of obtained phylogenetic hypothesis and put in a frame of recent knowledge.
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Study of chromosomal evolution in Xenopus mellotropicalis
Smolík, Ondřej ; Krylov, Vladimír (advisor) ; Nguyen, Petr (referee)
The evolutionary relationships in Xenopus genus are intensively studied for its interspecific variability and high conservation in evolution. These characteristics possess an opportunity for comparative studying of polyploidization phenomenom on interchromosomal level and an occasion to identify the genome-forming mechanisms with cytogenetic methods. XME chromosomes (X. mellotropicalis, 2n=40) were identified via p-/q- arm length ratio in a comparison with morphometric analysis of X. epitropicalis (2n=40) chromosomes. Whole chromosome painting probes were prepared from X. tropicalis (2n=20) microdissected chromosomes and they were applied to XME metaphase spreads via optimalized Zoo-FISH. 10 chromosomal quartets were detected and one balanced non-reciprocal translocation between chromosomes XME 2 and XME 9 which must have occured in a diploid ancestor. Thus, we disprove the theory of Silurana subgenus origin via only one polyploidizatin event. Powered by TCPDF (www.tcpdf.org)
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Comparative mapping of sex-linked genes in Lepidoptera
NGUYEN, Petr
Sequenced genome of the silkmoth, Bombyx mori, allowed comparative genomic studies in Lepidoptera. The presented thesis is concerned with synteny of sex-linked genes in moths and butterflies. I took advantage of available BAC libraries and by means of fluorescence in situ hybridization I constructed physical maps of the Z chromosome of the peppered moth, Biston betularia, and the codling moth, Cydia pomonella. The results revealed unexpected dynamics of the lepidopteran Z chromosome, which was found to be involved in both inter- and intrachromosomal rearrangements.
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