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Electrochemical biosensors with spatially separated enzymatic and detection parts for selective analysis in flow-through arrangement
Tvorynska, Sofiia ; Barek, Jiří (advisor) ; Labuda, Ján (referee) ; Korecká, Lucie (referee)
This dissertation thesis presents the newly developed four highly reusable, stable as well as simple, and cost-effective electrochemical (bi)enzymatic biosensors for the selective and reliable determination of choline, acetylcholine, uric acid, and L-lactic acid in flow injection analysis. All biosensors are based on the concept of the spatial separation of the biorecognition part from detection one and amperometric monitoring of the enzymatically consumed oxygen via its four-electron reduction at the highly negative detection potential. In this way, the design of the biosensors includes an easily replaceable enzymatic mini-reactor(s) connected upstream to the flow cell that contains the appropriate silver amalgam-based transducer. The enzymatic mini-reactor based on choline oxidase, uricase, or lactate oxidase was used for choline, uric acid, or L-lactic acid biosensors, respectively. The acetylcholine bienzymatic biosensor includes the consequently connected choline oxidase- and acetylcholinesterase-based mini-reactors. The first part of this thesis focuses on the construction of two different silver amalgam-based electrodes. Specifically, this section discusses the fabrication of a silver solid amalgam electrode covered by mercury film operating in a wall-jet cell and also highlights the...
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Study of Genotoxicity of Organic Compounds Using DNA Biosensors
Augustín, Michal ; Vyskočil, Vlastimil (advisor) ; Trnková, Libuše (referee) ; Labuda, Ján (referee)
Proposed dissertation thesis presents novel hybrid electrochemical DNA biosensors based on distinct forms of pyrolytic graphite ("edge-plane" and "basal-plane") and their potential in terms of applicability in the field of DNA electrochemistry. Testing of the applicability of the presented bioanalytical tools was preceded by thorough optimization process involving selection of the optimal values for the most crucial operational parameters of the electrochemical DNA biosensors fabricated by means of electrostatic adsorption - deposition potential (Edep), deposition time (tdep), optimal DNA concentration for electrostatic adsorption (cg(DNA)), and possible involvement of convection during the adsorption procedure. Initially, applicability of presented bioanalytical tools was investigated in relation to monitoring DNA damage by utilization of triplet of external DNA damaging sources - UV light irradiation, one- electron oxidants, and hydroxy radicals. Outcome of the damaging processes was monitored directly (via monitoring changes in the redox signals of DNA) or indirectly (via monitoring changes in the redox signals of redox indicator) by the use of voltammetric methods - square- wave voltammetry (SWV), cyclic voltammetry (CV), linear-sweep voltammetry (LSV), and electrochemical impedance...
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Development of electrochemical methods for study of antibacterial compounds in small volumes
Gajdár, Július ; Barek, Jiří (advisor) ; Šiškanova, Tatiana (referee) ; Labuda, Ján (referee)
Main goal of this Ph.D. thesis is to develop voltammetric methods for the electrochemical study of novel antimycobacterial compounds hydroxynaphthalene- carboxamides. Firstly, this study was focused on the miniaturization of voltammetric methods and construction of an electrochemical microcell due to usually small volume of samples that are associated with an analysis of biologically active compounds in biological matrices. Therefore, all aspects of the voltammetric procedure were studied in a relation to miniaturization. Microcells were based on commercially available electrodes: glassy carbon electrode as a reliable electrode material with well-described characteristics and a novel silver solid amalgam electrode. This study was carried out with analytes 4-nitrophenol, pesticide difenzoquat, and 1-hydroxy-N-(4-nitrophenyl)naphthalene-2-carboxamide. Attention was paid especially to the optimization of oxygen removal procedures in the drop of a solution. Developed miniaturized methods had the same parameters for the determination of studied compounds as in bigger volumes. The proposed electrochemical microcell can be generally used for voltammetric analysis of those samples of biological or environmental origin that are usually available in very limited volumes. Second part of the thesis was focused...
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Novel Approaches in Electrochemical Determination of Xenobiotic Compounds and in Study of Their Interaction with DNA
Hájková, Andrea ; Vyskočil, Vlastimil (advisor) ; Trnková, Libuše (referee) ; Labuda, Ján (referee)
Presented Ph.D. Thesis is focused on the development of analytical methods applicable for determination of selected xenobiotic compounds and for monitoring DNA damage they can induce. The main attention has been paid to the development and testing of non-toxic electrode materials for preparation of miniaturized electrochemical devices and novel electrochemical DNA biosensors. 2-Aminofluoren-9-one (2-AFN) was selected as a model environmental pollutant, which belongs to the group of hazardous genotoxic substances. Its carcinogenic and mutagenic effects may represent a risk to living and working environment. 2-AFN has one oxo group, where the cathodic reduction occurs, and one amino group, where the anodic oxidation occurs. The voltammetric behavior of 2-AFN in the negative potential region was investigated at a mercury meniscus modified silver solid amalgam electrode (m-AgSAE) representing a non-toxic and more mechanically robust alternative to mercury electrodes. This working electrode was subsequently used for the development of a newly designed miniaturized electrode system (MES), which has many benefits as the possibility of simple field measurements, easy portability, and the measurement in sample volume 100 µL. Moreover, a glassy carbon electrode (GCE) was used for further investigation of...
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Development of Novel Electrochemical Methods Using Various Membrane Materials for Monitoring of Selected Anticancer Drugs and Phytochelatins
Skalová, Štěpánka ; Barek, Jiří (advisor) ; Labuda, Ján (referee) ; Trnková, Libuše (referee)
Present Ph.D. Thesis is focused on the development of electrochemical methods for determination of anticancer drugs using various types of membranes for their preliminary separation. Furthermore, this Thesis reports the study of transport mechanisms of heavy metals in the presence of phytochelatins across biological membranes. Sodium anthraquinone-2-sulphonate (AQS) was used as a model compound for its similar structure with anthraquinone-based (AQ-based) anticancer drugs (doxo/daunorubicin) and also due to its better availability. All these compounds can be easily electrochemically oxidized and/or reduced. Redox behaviour of AQS was investigated by cyclic voltammetry (CV) and differential pulse voltammetry (DPV) in a cathodic region on mercury meniscus modified (m-AgSAE) and polished silver solid amalgam (p-AgSAE) electrodes, Obtained results were used for the development of a micro-volume voltammetric cell (MVVC). Its applicability for voltammetric determination of anticancer drugs was verified by using doxorubicin (DX) as a model substance. The second part of this Thesis deals with therapeutic monitoring of anticancer drugs in the blood circulation of the patients. For pilot experiments, a liquid-flow system with dialysis catheter and amperometric detection was used. The flow rate of carrier...
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The Use of New Types of Carbon Electrodes for Voltammetric Determination of Organic Compounds
Birhanzlová, Tereza ; Barek, Jiří (advisor) ; Labuda, Ján (referee) ; Ludvík, Jiří (referee)
This Ph.D. thesis is focused on the use of a new type of non-toxic electrode (carbon film electrode - CFE) for voltammetric determination of environmental organic pollutants and on the development and use of a new type of solid electrode modified with carbon nanotubes for the determination of 2-nitrophenol (2-NP) and 8-nitroquinoline (8-NQ). The work is a continuation of the previous study of 5- nitroquinoline (5-NQ) using CFE in author's bachelor and diploma thesis. The determination of 5-NQ based on anodic oxidation is not possible at CFE and thus 2-NP was chosen as a model substance for voltammetric determination in both regions of potential window (cathodic and anodic). Further attention was paid to the development of a new type of carbon electrode with surface containing carbon nanotubes and its application for the determination of 8-NQ using differential pulse voltammetry (DPV) based on cathodic reduction of present nitro group. Silver solid electrode (AgE) as a substrate electrode for following modification was used. At first, the AgE itself was used for determination of 8-NQ in deionized water and in model samples of drinking and river water. Then the possibility of electrode surface modification using different type of carbon nanotubes was investigated. The AgE modified with carboxylated...
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Voltammetric and amperometric determination of homovanillic, vanillylmandelic, and 5-hydroxyindole-3-acetic acid
Němečková, Anna ; Barek, Jiří (advisor) ; Labuda, Ján (referee) ; Skopalová, Jana (referee)
Presented dissertation thesis is focused on the development of electrochemical methods for the determination of three important tumour biomarkers, namely homovanillic acid (HVA), vanillylmandelic acid (VMA), and 5-hydroxyindole-3-acetic acid (5-HIAA). First part of the study is focused on electrochemical behaviour of these analytes in batch arrangement using differential pulse voltammetry (DPV) at screen-printed carbon electrodes (SPCEs). It has been proved that presented method is sufficiently sensitive for monitoring above mentioned analytes. Moreover, it can be used for determination of HVA and VMA in mixture. Obtained limits of detection (LODs) were 0.24 µmol·L-1 for HVA, 0.06 µmol·L-1 for VMA, and 0.12 µmol·L-1 for 5-HIAA. The requirements to speed up the analysis and at the same time to reduce its price initialized our study of the determination of tested biomarkers in flow systems. Firstly, flow injection analysis with amperometric detection was investigated for the determination of all three biomarkers at the same SPCE, and then an analogous determination of structural more similar pair, HVA and VMA, was performed at a boron doped diamond electrode (BDDE). Obtained LODs of optimized methods were as follows: at SPCE 0.07 µmol·L-1 for HVA, 0.05 µmol·L-1 for VMA, and 0.03 µmol·L-1 for 5-HIAA,...
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The Use of New Types of Carbon Electrodes for Voltammetric Determination of Organic Compounds
Birhanzlová, Tereza ; Barek, Jiří (advisor) ; Labuda, Ján (referee) ; Ludvík, Jiří (referee)
This Ph.D. thesis is focused on the use of a new type of non-toxic electrode (carbon film electrode - CFE) for voltammetric determination of environmental organic pollutants and on the development and use of a new type of solid electrode modified with carbon nanotubes for the determination of 2-nitrophenol (2-NP) and 8-nitroquinoline (8-NQ). The work is a continuation of the previous study of 5- nitroquinoline (5-NQ) using CFE in author's bachelor and diploma thesis. The determination of 5-NQ based on anodic oxidation is not possible at CFE and thus 2-NP was chosen as a model substance for voltammetric determination in both regions of potential window (cathodic and anodic). Further attention was paid to the development of a new type of carbon electrode with surface containing carbon nanotubes and its application for the determination of 8-NQ using differential pulse voltammetry (DPV) based on cathodic reduction of present nitro group. Silver solid electrode (AgE) as a substrate electrode for following modification was used. At first, the AgE itself was used for determination of 8-NQ in deionized water and in model samples of drinking and river water. Then the possibility of electrode surface modification using different type of carbon nanotubes was investigated. The AgE modified with carboxylated...
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Development of electrochemical methods for study of antibacterial compounds in small volumes
Gajdár, Július ; Barek, Jiří (advisor) ; Šiškanova, Tatiana (referee) ; Labuda, Ján (referee)
Main goal of this Ph.D. thesis is to develop voltammetric methods for the electrochemical study of novel antimycobacterial compounds hydroxynaphthalene- carboxamides. Firstly, this study was focused on the miniaturization of voltammetric methods and construction of an electrochemical microcell due to usually small volume of samples that are associated with an analysis of biologically active compounds in biological matrices. Therefore, all aspects of the voltammetric procedure were studied in a relation to miniaturization. Microcells were based on commercially available electrodes: glassy carbon electrode as a reliable electrode material with well-described characteristics and a novel silver solid amalgam electrode. This study was carried out with analytes 4-nitrophenol, pesticide difenzoquat, and 1-hydroxy-N-(4-nitrophenyl)naphthalene-2-carboxamide. Attention was paid especially to the optimization of oxygen removal procedures in the drop of a solution. Developed miniaturized methods had the same parameters for the determination of studied compounds as in bigger volumes. The proposed electrochemical microcell can be generally used for voltammetric analysis of those samples of biological or environmental origin that are usually available in very limited volumes. Second part of the thesis was focused...
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