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Detection and variation of the crayfish plague pathogen in selected crayfish populations
Mojžišová, Michaela ; Petrusek, Adam (advisor) ; Buřič, Miloš (referee)
Crayfish plague is an emerging disease caused by the oomycete Aphanomyces astaci, a pathogen listed among the 100 World's Worst Invasive Alien Species. It was introduced into Europe in the second half of 19th century from North America and caused collapses of European native crayfish populations. Nowadays, A. astaci is widespread in Europe and has spread also to other parts of the world, threatening all susceptible crayfish of non-North American origin. The aims of this MSc thesis were 1) to provide information about crayfish plague outbreaks from recent years, and by using microsatellite and mtDNA markers reveal A. astaci genotypes involved; 2) to test healthy-looking indigenous crayfish for potential occurrence of chronic infections by A. astaci in Czechia. Six new crayfish plague outbreaks were confirmed from 2016 to 2018, involving at least five distinct pathogen strains. My results provide first evidence of the A. astaci genotype group D causing Astacus astacus and Austropotamobius torrentium mass mortalities in Czechia. MtDNA sequencing revealed two haplotypes of the D haplogroup, indicating two independent sources of infection presumably either from ornamental crayfish or spreading from neighbouring countries. The genotype group A was recorded in two A. astacus mortalities and genotype group...
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Genetic diversity of stone crayfish Austropotamobius torrentium in marginal areas of its distribution
Pešek, Pavel ; Petrusek, Adam (advisor) ; Kouba, Antonín (referee)
Central Europe north of the Alps was colonized by one of the Balkan haplotype lineage of stone crayfish Austropotamobius torrentium after the end of the last ice age. Stone crayfish is considered a native species in the basins of the Danube and the Rhine. The origin of populations from the Elbe basin is still debated. Most of recent European studies dealing with the crayfish distribution indicate the stone crayfish in Elbe basin as non-indigenous species. The main aim of my work was to evaluate the question of the origin of stone crayfish in the Elbe catchment by describing the distribution of genetic variability, which has not been yet studied in the Elbe river basin for this species. I have used 617 base pairs long section of mitochondrial gene for small subunit I of cytochrome c oxidase (COI). The variability of this marker is reduced in area on the north of Alps, which agrees with assumption of rapid colonization after the end of last ice age. Observed haplotype diversity is nevertheless sufficient to suggest the most likely scenario. Among 22 populations from Elbe basin, one dominant and three rare haplotypes were found. Individuals from the isolated Luční creek close to the Krkonoše (Giant Mountains) region have a haplotype that has so far been found only in central Slovenia, and this population has...
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Distribution and Ecology of the Stone Crayfish and Noble Crayfish in the Drainage Area of the Zákolanský stream
Kubínyiová, Eva ; Mourek, Jan (advisor) ; Hanel, Lubomír (referee)
This thesis is composed of two parts - research part, focused on field research of occurence and abundance of the Stone Crayfish and the Noble Crayfish in the basin of Zákolanský stream, and a pedagogical part, project Crayfish in the Czech Republic and their protection, aimed for grammar school students. The literature outline summarizes contemporary knowledge about all five species of crayfish in the Czech Republic. Our native species are the Stone Crayfish (Austropotamobius torrentium) and Noble Crayfish (Astacus astacus). The non-native are Narrow-clawed Crayfish (Astacus leptodactylus), Spiny-cheek Crayfish (Orconectes limosus) and Signal Crayfish (Pacifastacus leniusculus). Aside from the chapters concerning the particular species and their determination, the literature outline also contains general information about the life and endangerment of crayfish. I have conducted the field research from April to September 2009. I also noted and evaluated the environmental conditions of the crayfish habitats. Based on the adjusted AOPK ČR methodology, I selected eight 100-meter long brook-sections of the Europe-important locality of Zákolanský stream, with the previously confirmed occurrence of crayfish. From the eight sections, I found crayfish only in three. All the captured specimens were of the...
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Detection and variation of the crayfish plague pathogen in selected crayfish populations
Mojžišová, Michaela ; Petrusek, Adam (advisor) ; Buřič, Miloš (referee)
Crayfish plague is an emerging disease caused by the oomycete Aphanomyces astaci, a pathogen listed among the 100 World's Worst Invasive Alien Species. It was introduced into Europe in the second half of 19th century from North America and caused collapses of European native crayfish populations. Nowadays, A. astaci is widespread in Europe and has spread also to other parts of the world, threatening all susceptible crayfish of non-North American origin. The aims of this MSc thesis were 1) to provide information about crayfish plague outbreaks from recent years, and by using microsatellite and mtDNA markers reveal A. astaci genotypes involved; 2) to test healthy-looking indigenous crayfish for potential occurrence of chronic infections by A. astaci in Czechia. Six new crayfish plague outbreaks were confirmed from 2016 to 2018, involving at least five distinct pathogen strains. My results provide first evidence of the A. astaci genotype group D causing Astacus astacus and Austropotamobius torrentium mass mortalities in Czechia. MtDNA sequencing revealed two haplotypes of the D haplogroup, indicating two independent sources of infection presumably either from ornamental crayfish or spreading from neighbouring countries. The genotype group A was recorded in two A. astacus mortalities and genotype group...
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Diverzita makrozoobentosu v Evropsky významné lokalitě výskytu raka kamenáče (Austropotamobius torrentium)
PEŘINOVÁ, Eliška
The "Zákolanský potok" takes part in European nature program Special Area of Conservation because of the presence of stone crayfish (Austropotamobius torentium), which is listed as threatened species. The area around brook is intensively agriculturally cultivated. Water from wastewater treatments plants is drained to the local brooks. The aim of the work was to describe diversity of macrozoobenthos on the brook called "Zákolanský potok". Further aim was to evaluate the ecological condition of the watercourse using biotic indexes. The samples of macrobenthos were taken from three profiles in five sampling periods. Profile 1 was control, profile 2 was under the wastewater treatments plants and the third profile was placed down the stream. Diversity, biomass, saprobic index, BMWP, and ASTP scores were evaluated for the community of macrozoobenthos. The saprobic index was evaluated to the beta-mezosaprobity value (2.0-2.4) in the first profile, the saprobic index on the second profile showed a relatively wide range from worse oligosaprobity to worse beta-mesosaprobity (1.2-2.4). On the third profile, the saprobic index ranged from better beta-mesosaprobity to better alpha-mesosaprobity (1.6-2.6). The BMWP and ASPT scores in all profiles refer to medium to low quality aquatic environments. The diversity of the community gained the best values on the 3rd profile, here was found with one more taxon than on the 1st profile. With increasing organic load, diversity decreased on the 2nd profile, although a more sensitive species was found here.
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Vyhodnocení plodnosti raka signálního včetně post-ovulačního stavu vaječníků
FOJT, Martin
The theoretical part of diploma thesis is aimed at breeding, growth and molting events in crayfish. Thesis is also aimed at life cycle and reproduction of three indigenous crayfish species (Astacus astacus, Austropotamobius torrentium, Pontastacus leptodactylus) and two introduced crayfish species (Faxonius limosus, Pacifastacus leniusculus). The results show apparent linear dependence between female size (POCL), abdomen surface (1M: y = -1061,2 + 65,4*x; r2 = 0,9829; p10-5; 2M: y = -1160,4 + 68,7*x; r2 = 0,8732; p < 10-5) and fertility (1M: y = -194,4 + 12,8*x; r2 = 0,4104 p = 0,0042; y = -330.9 + 15,9*x; r2 = 0.4372; p < 10-4) in once (1M) and twice (2M) molted females. As the length of carapax increase, the area of the abdomen increase and fertility increase in both groups of females. Furthermore, the differences in fertility, carapax length, abdomen surface, and weights in once and twice molted females of signal crayfish. In group of once molted females fertility (t-test, t = -3.12, p = 0.003), carapax length (t-test, t = -3.17, p = 0.003) = -3.24; p = 0.002) and the weight (t-test, t = -3.35; p = 0.002) was higher than in twice molted group of female. Consequentially evaluation of egg size of females. The size of the eggs did not differ between groups of females (1M and 2M) (t-test, t = -0.975, p = 0.335). The mean egg size for both groups of females was 2.71 ? 0.18 mm. Evaluation of post-ovulation conditions of the ovary, including visible signs of females that resorbed unovulated oocytes. Evaluating how much unovulated oocytes were found in the ovaries. Only in 46.4% of the total number of females were ovaries completely empty. In once and twice molted females were found in average 2.2 ? 3.8 and 1.9 ? 2.6. unovulated oocytes, respectively. In once molted, three females didn't lay eggs, two females lost the clutch of eggs. In twice molted females, six females did not lay the eggs and four females lost the clutch.
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Genetic diversity of stone crayfish Austropotamobius torrentium in marginal areas of its distribution
Pešek, Pavel ; Petrusek, Adam (advisor) ; Kouba, Antonín (referee)
Central Europe north of the Alps was colonized by one of the Balkan haplotype lineage of stone crayfish Austropotamobius torrentium after the end of the last ice age. Stone crayfish is considered a native species in the basins of the Danube and the Rhine. The origin of populations from the Elbe basin is still debated. Most of recent European studies dealing with the crayfish distribution indicate the stone crayfish in Elbe basin as non-indigenous species. The main aim of my work was to evaluate the question of the origin of stone crayfish in the Elbe catchment by describing the distribution of genetic variability, which has not been yet studied in the Elbe river basin for this species. I have used 617 base pairs long section of mitochondrial gene for small subunit I of cytochrome c oxidase (COI). The variability of this marker is reduced in area on the north of Alps, which agrees with assumption of rapid colonization after the end of last ice age. Observed haplotype diversity is nevertheless sufficient to suggest the most likely scenario. Among 22 populations from Elbe basin, one dominant and three rare haplotypes were found. Individuals from the isolated Luční creek close to the Krkonoše (Giant Mountains) region have a haplotype that has so far been found only in central Slovenia, and this population has...
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Distribution and Ecology of the Stone Crayfish and Noble Crayfish in the Drainage Area of the Zákolanský stream
Kubínyiová, Eva ; Mourek, Jan (advisor) ; Hanel, Lubomír (referee)
This thesis is composed of two parts - research part, focused on field research of occurence and abundance of the Stone Crayfish and the Noble Crayfish in the basin of Zákolanský stream, and a pedagogical part, project Crayfish in the Czech Republic and their protection, aimed for grammar school students. The literature outline summarizes contemporary knowledge about all five species of crayfish in the Czech Republic. Our native species are the Stone Crayfish (Austropotamobius torrentium) and Noble Crayfish (Astacus astacus). The non-native are Narrow-clawed Crayfish (Astacus leptodactylus), Spiny-cheek Crayfish (Orconectes limosus) and Signal Crayfish (Pacifastacus leniusculus). Aside from the chapters concerning the particular species and their determination, the literature outline also contains general information about the life and endangerment of crayfish. I have conducted the field research from April to September 2009. I also noted and evaluated the environmental conditions of the crayfish habitats. Based on the adjusted AOPK ČR methodology, I selected eight 100-meter long brook-sections of the Europe-important locality of Zákolanský stream, with the previously confirmed occurrence of crayfish. From the eight sections, I found crayfish only in three. All the captured specimens were of the...
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Cray fish as bioindicators of human impact in freshwater ecosystems in CR - sensitivity of model species on selected toxic compounds and case study from the model catchment
MAHOVSKÁ, Ivana
This thesis deals with monitoring the occurrence of crayfish in selected river basins in the western Bohemia, considering the human impact on freshwater ecosystems and his influence on crayfish and other aquatic organisms. The selected river basin territory was Úhlava, Úslava and Otava. In the localities, numerical and species-wise representation of crayfish was monitored by finding data from the Agency for Nature Conservation and Landscape of Czech Republic database. The flow and environment characteristics were also monitored. This thesis focuses on water quality in streams of selected major river basins, Úhlava, Úslava and Otava rivers in the period from 2006 to 2011. Results of the findings show a sympatric occurrence of original species, stone crayfish (Austropotamobius torrentium), noble crayfish (Astacus astacus) and part of the original danube crayfish (Astacus leptodactylus) with invasively spreading species of spiny-cheek crayfish (Orconectes limosus) and signal crayfish (Pacifastacus leniusculus). With respect to this fact, the sensitivity of spiny-cheek crayfish (Orconectes limosus) and signal crayfish (Pacifastacus leniusculus) are evaluated in a form of own test results on acute toxicity. The thesis compared current results of occurrence and the protection of crayfish in the Czech Republic and abroad. The conclusion of this thesis is a proposal of a freshwater biomonitoring system, using the crayfish.
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Impact of american mink on stone crayfish populations
PAVLUVČÍK, Petr
1. Impact of introduced American mink (Mustela vison) predation on endangered stone crayfish (Austropotamobius torrentium) was examined in western Bohemian middle-sized streams for two years. Mink diet selectivity and its impact on its prey abundance were been investigating as the main target of this study. 2. The mink diet was described from excrements which were found on the target areas. The importance of different types of prey was specified by their relative numeric contribution to diet. The number of hunted crayfish was elicited from the number of crayfish remains which were collected during two years. The crayfish abundance was determined by capture {--} recapture method. 3. The crayfish was most frequently observed component of mink diet. The rate of mink predation on crayfish was dependent on density of crayfish population. This observed rate was lower during winters than during summers. The mink preferred significantly longer crayfish than was the mean of this value in population. 4. Although the crayfish was important part of mink diet the trend of impact of mink on crayfish is still inexplicit. It would be important to continue in this research to determine correlation between these two species.
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