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National Repository of Grey Literature

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Synonymous codon usage bias in mitochondrial genomes Urbanová, Hedvika ; Cicková, Pavlína (referee) ; Maděránková, Denisa (advisor) This Bachelors thesis deals with synonymous codon usage bias in mitochondrial genomes. This thesis covers basic terms of bioinformatics and genetics. Codon usage bias is introduced together with parameters that characterize it. Practical part of the thesis is dealing with programs that are designed to calculate parameters of codon usage bias. Programs that are described in this thesis are relative synonymous codon usage, relative adaptation index, codon adaptation index, homozygosity of codons, and effective number of codons. Synonymous codon usage bias in mitochondrial genome of Homo sapiens is analysed. Detailed record

Synonymous codon usage bias in mitochondrial genomes Urbanová, Hedvika ; Cicková, Pavlína (referee) ; Maděránková, Denisa (advisor) This Bachelors thesis deals with synonymous codon usage bias in mitochondrial genomes. This thesis covers basic terms of bioinformatics and genetics. Codon usage bias is introduced together with parameters that characterize it. Practical part of the thesis is dealing with programs that are designed to calculate parameters of codon usage bias. Programs that are described in this thesis are relative synonymous codon usage, relative adaptation index, codon adaptation index, homozygosity of codons, and effective number of codons. Synonymous codon usage bias in mitochondrial genome of Homo sapiens is analysed. Detailed record

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