|
Intel Integrated Performance Primitives and their use in application development
Machač, Jiří ; Přinosil, Jiří (referee) ; Malý, Jan (advisor)
The aim of the presented work is to demonstrate and evaluate the contribution of computing system SIMD especially units MMX, SSE, SSE2, SSE3, SSSE3 and SSE4 from Intel company, by creation of demostrating applications with using Intel Integrated Performance Primitives library. At first, possibilities of SIMD programming using intrinsic function, vektorization and libraries Intel Integrated Performance Primitives are presented, as next are descibed options of evaluation of particular algorithms. Finally procedure of programing by using Intel Integrated Performance Primitives library are ilustrated.
|
| |
|
Application for Alignment of DNA Parts
Kašpárek, Tomáš ; Žák, Jakub (referee) ; Rozman, Jaroslav (advisor)
This thesis deals with DNA sequences alignment methods with focus on execution speed of given task and its optimality. The outcome of this thesis results in multiple programs, which presents DNA alignment algorithms and their versions programmed with OpenCL libraries, which are optimized on calculation rate. Text of this thesis apprises reader with DNA alignment problematic and its importance in biology. Further, algorithms for DNA alignment and options of their speed-up using libraries like CUDA or OpenCL are presented.
|
| |
|
Application for Alignment of DNA Parts
Kašpárek, Tomáš ; Žák, Jakub (referee) ; Rozman, Jaroslav (advisor)
This thesis deals with DNA sequences alignment methods with focus on execution speed of given task and its optimality. The outcome of this thesis results in multiple programs, which presents DNA alignment algorithms and their versions programmed with OpenCL libraries, which are optimized on calculation rate. Text of this thesis apprises reader with DNA alignment problematic and its importance in biology. Further, algorithms for DNA alignment and options of their speed-up using libraries like CUDA or OpenCL are presented.
|
|
Intel Integrated Performance Primitives and their use in application development
Machač, Jiří ; Přinosil, Jiří (referee) ; Malý, Jan (advisor)
The aim of the presented work is to demonstrate and evaluate the contribution of computing system SIMD especially units MMX, SSE, SSE2, SSE3, SSSE3 and SSE4 from Intel company, by creation of demostrating applications with using Intel Integrated Performance Primitives library. At first, possibilities of SIMD programming using intrinsic function, vektorization and libraries Intel Integrated Performance Primitives are presented, as next are descibed options of evaluation of particular algorithms. Finally procedure of programing by using Intel Integrated Performance Primitives library are ilustrated.
|