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National Repository of Grey Literature 2 records found  Search took 0.00 seconds. 
Comparison and Transformations of Pathway Databases
 Němeček, Pavel ; Šilhavá, Jana (referee) ; Smrž, Pavel (advisor)
The main topic of this work are comparison and transformations of pathway databases. Large part is dedicated to databases KEGG and BioCarta. In work are described formats of provided data. In process of searching for overlapping pathways between databases are used clustering, edit distance, NCBI gene numbers and equivalent relationships comparison. The system was written in C++ and using XML parser. Results are text outputs, eventually files in DOT language, which can be executed with GraphViz to generate graphs.
Detailed record
Comparison and Transformations of Pathway Databases
 Němeček, Pavel ; Šilhavá, Jana (referee) ; Smrž, Pavel (advisor)
The main topic of this work are comparison and transformations of pathway databases. Large part is dedicated to databases KEGG and BioCarta. In work are described formats of provided data. In process of searching for overlapping pathways between databases are used clustering, edit distance, NCBI gene numbers and equivalent relationships comparison. The system was written in C++ and using XML parser. Results are text outputs, eventually files in DOT language, which can be executed with GraphViz to generate graphs.
Detailed record

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