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Phylogenetic Position of Genus Polymastix and Its Prokaryotic Symbionts
 Kubánková, Aneta ; Hampl, Vladimír (advisor) ; Kolísko, Martin (referee)
Polymastigidae is one of the five families of oxymonads (Metamonada, Preaxostyla). It includes small flagellates inhabiting the digestive tract of insects. Recently obtained molecular phylogenetic data have questioned the monophyly of this group. The type genus of the family Polymastigidae is Polymastix. The phylogenetic position of this genus has not been studied yet, although this information could significantly help to clarify the relationships within this group. This work provides the first sequence data of this genus, which we have obtained using a single- cell genome amplification and subsequent whole genome sequencing on Illumina HiSeq X Ten (Macrogene) from three individuals of P. melolonthae inhabiting the posterior hindgut of crane fly larvae. Phylogenetic analysis based on the gene for 18S rRNA, EF-1α and HSP90 yielded several roughly equally probable hypotheses about the position of this genus within Oxymonadida. The first of them places the genus Polymastix in a close proximity to the genus Streblomastix, according to the second hypothesis, Polymastix is sister to Termitimonas travisae. A characteristic feature of this protist is ectosymbiotic bacteria attached to its surface. These were necessarily amplified and sequenced together with their hosts, which allowed us to obtain sequence...
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Prokaryotic symbionts of protists living in the intestine of wood eating cockroaches and termites
 Kubánková, Aneta ; Hampl, Vladimír (advisor) ; Rotterová, Johana (referee)
Termites and wood-eating cockroaches are worldwide successful especially because of their ability to digest lignocellulose efficiently. After a long period of coevolution a complex ecosystem of diverse microorganisms was established in their hindgut. A lot of lineages of flagellates live solely within this unique environment and it is impossible to cultivate them in vitro. As termites are unable to survive without their eukaryotic endosymbionts, also protists are strongly linked to prokaryotes colonizing their cytoplasm and cytoplasmic membrane. Numerous phyla of bacteria participate in nitrogen fixation and efficient nitrogen utilization, synthesis of amino acids, cofactors and vitamines. Some of them take part in the degradation of lignocellulose. Representatives of another domain of prokaryotes, Archea, are important in the final stages of lignocellulose fermentation, because they utilize the produced hydrogen gas in a process of methanogenesis. Large part of our knowledge about the composition and function of the termite gut biota was acquired thanks to metagenomic studies.
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See also: similar author names
1 Kubánková, Adéla
4 Kubánková, Alexandra
2 Kubánková, Anna
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