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National Repository of Grey Literature

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Acceleration of Burrows-Wheeler Transform Using GPU Zahradníček, Tomáš ; Drábek, Vladimír (referee) ; Šimek, Václav (advisor) This thesis deals with Burrows-Wheeler transform (BWT) and possibilities of acceleration of this transform on graphics processing unit (GPU). Methods of compression based on BWT are introduced, as well as software libraries CUDA and OpenCL for writing programs for GPU. Parallel variants of BWT are implemented, as well as following steps necessary for compression, using CUDA library. Amount of compression of used approaches are tested and parallel versions are compared to their sequential counterparts. Detailed record

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