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Transcription motif finding in non-model organisms
 Helešicová, Klára ; Jurečková, Kateřina (referee) ; Musilová, Jana (advisor)
This bachelor thesis deals with the search for DNA motifs in non-model organisms. The first part explains the process of transcription, the concept of mutual information and an algorithm using mutual information. The second part describes the distribution of motif searching methods and examples of algorithms. The third part contains an overview of transcription motif databases. The practical part contains a description of the creation of a dataset for a non-model organism, a description of the proposed algorithm and its testing on the dataset. Then, the results of the proposed algorithm were compared with the results of FIRE and MEME algorithms.
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