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Novel Molecular Materials for Optics - Synthesis and Characterization of 5-aminotetrazole Salts
Pospíšil, Stanislav ; Zábranský, Martin (advisor) ; Tyrpekl, Václav (referee)
Title: Novel Molecular Materials for Optics - Synthesis and Characterization of 5-aminotetrazole Salts Author: Stanislav Pospíöil Department: Department of Inorganic Chemistry Supervisor: Mgr. Martin Zábransk˝, Ph.D., Department of Inorganic Chemistry Advisors: Prof. RNDr. Ivan N mec, Ph.D., RNDr. Irena Matulková, Ph.D., De- partment of Inorganic Chemistry Abstract: Nonlinear optics is currently an important field for the development of areas such as laser physics or telecommunications, and its understanding is essen- tial for development of new technologies. Its development can also be aided by the investigation of various crystalline materials, such as salts containing cations and anions derived from polarizable organic molecules, exhibiting essential properties for nonlinear optics. This bachelor thesis is focused on preparation of crystalline forms of these compounds. These are salts of simple, nitrogen-rich bases with 5- aminotetrazole. Bigunidium 5-aminotetrazolate, guanidinium 5-aminotetrazolate and aminoguanidium 5-aminotetrazolate were prepared and further characteri- zed. The structures of the latter salts were solved from X-ray di raction data. The methods of spectral vibrational analysis supplemented with nuclear magne- tic resonance and powder di raction were applied to these prepared compounds....
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Novel materials for NLO applications based on guanidine derivatives - crystal engineering and detailed characterisation
Kohúteková, Soňa ; Němec, Ivan (advisor) ; Kalbáč, Martin (referee) ; Vlčková, Blanka (referee)
Title: Novel materials for NLO applications based on guanidine derivatives - crystal engineering and detailed characterisation Author: Mgr. Soňa Kohúteková Department: Department of Inorganic Chemistry Supervisor: prof. RNDr. Ivan Němec, Ph.D. Abstract: This doctoral thesis is focused on the preparation and characterisation of new compounds for potential application in nonlinear optics (NLO). Four molecules containing guanidine fragment were chosen as the carriers of NLO properties - aminoguanidine, diaminoguanidine, N-guanidine-formamide and 1H-pyrazole-carboxamidine, according to the promising preliminary results of hyperpolarizability values obtained by quantum-chemical calculations. Experimental work was divided into two main directions of preparation of new crystalline materials - preparation of perovskite metal-organic frameworks (MOFs) and molecular crystals. In the first group of studied materials, target molecules were expected to occupy cavities of frameworks built by formate anions coordinated to metal cations. In the second group, in the molecular crystals, carriers of NLO properties were co-crystallised with selected inorganic anions to prevent the formation of centrosymmetric dimers and to influence the desired crystal packing. Prepared materials were characterised mainly by the means of...
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Preparation and characterization of crystalline materials - salts of N-guanylglycinium and guanidinium
Skopalík, Jiří ; Matulková, Irena (advisor) ; Zákutná, Dominika (referee)
The scope of this bachelor thesis is the preparation and study of new salts, which can be obtained from systems N-guanylglycine - inorganic acid and guanidine - amidosulfuric acid, as new materials with potential for applications in nonlinear optics. Prepared crystalline salts of N-guanylglycinium - i.e. chloride, two hydrogenphosphites and sulfate dihydrate along with guanidinium amidosulfate were characterized by methods of vibrational spectroscopy (infrared and Raman) and X-ray diffraction (single crystal and powder methods). To estimate the nonlinear optical properties and for the interpretation of the vibrational manifestations of N-guanylglycinium cation, quantum-chemical calculations were performed. Finally, for two non-centrosymmetric N-guanylglycinium hydrogenphosphites, the efficiency of second harmonic generation was determined for powder samples.
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Elementary Processes at Low Temperatures - Reactions of H3+ and N2H+ in Afterglow Plasmas
Kálosi, Ábel ; Plašil, Radek (advisor) ; Rubovič, Peter (referee) ; Španěl, Patrik (referee)
Electron-ion recombination and ion-neutral interactions play a piv- otal role in the chemical evolution of molecules in the Interstellar Medium (ISM). Physical conditions under which these processes un- dergo in the ISM include a wide range of temperatures and particle number densities. This work contributes to the experimental study of named low temperature phenomena in the range of 30 K to 300 K focusing on the reactions of hydrogen-containing light molecules. The employed experimental techniques are based on a combination of a Stationary Afterglow (SA) instrument with a Continuous Wave Cavity Ring-down Spectrometer (cw-CRDS). The main contributions of this work can be split into three topics. (1) The proton and deuteron con- taining isotopic system of H3 + ions. The isotopic fractionation process in collisions with hydrogen and deuterium gas was investigated in low temperature discharges, nominal ion temperatures of 80 K to 140 K, to deduce relative ion densities in the experiments. These are necessary for afterglow studies of isotopic effects in electron-ion recombination of the studied ions. (2) Vibrational spectroscopy of N2H+ ions focusing on first overtone (2ν1 band) transitions and ion thermometry, the first step towards studies of electron-ion recombination. (3) The role of para/ortho spin...
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Application of vibrational spectroscopy in the study of violacein pigment
Váňová, Hana ; Němec, Ivan (advisor) ; Šmejkal, Petr (referee)
This thesis deals with the study of microbial pigment violacein in the real sample of lyophilized microorganisms. The sample was investigated by using methods of vibrational spectroscopy with focusing on the applicability of surface enhanced and resonance micro-Raman spectroscopy. For this purpose several different systems for enhancing Raman intensity together with the set of excitation lasers emitting in the visible light region were used. The conclusion of this thesis are the recommendations connected with the appropriateness of using each amplifying systems and excitation wavelengths for the successful identification of violacein pigment in the sample. Powered by TCPDF (www.tcpdf.org)
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Preparation and characterization of novel molecular materials for nonlinear optics
Mathauserová, Jana ; Němec, Ivan (advisor) ; Nižňanský, Daniel (referee)
The main issue of this bachelor thesis is the investigation of salts and cocrystals of biuret and 2-aminopyrimidine in consideration of their usage in the field of nonlinear optics. The first attempt of this thesis was preparation of compounds combining biuret with organic or inorganic acids, urea and biguanide. The second part is focused on the searching of new salts of 2-aminopyrimidine and on further characterisation of its formerly prepared compounds. The methods employed to investigate the prepared materials include vibrational spectroscopy and X-ray diffraction analysis. The theoretical quantum mechanical calculations were used to predict the nonlinear optical properties of selected molecules and also for the interpretation of the recorded vibrational spectra. Measurements of second harmonic generation efficiency of selected powder samples were performed.
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Spectroscopy study of metal complexes with terpyridyl ligands
Kožíšek, Jan ; Šloufová, Ivana (advisor) ; Procházka, Marek (referee)
The work is focused on preparation and characterization of octahedral Fe(II) complexes of 2,2′:6′,2′′-terpyridine (tpy) substituted in 4' position by various groups: Cl (tpyCl), chlorophenyl (tpyPhCl) and 2-thienyl (Ttpy)). Formation and stability of prepared complexes were studied by UV/vis spectroscopy on the basis of titration of tpy ligands by Fe(II) ions. The molar absorption coefficient of the metal-to-ligand charge transfer (MLCT) band was found to increase in the order: tpy < tpyCl < tpyPhCl < Ttpy. The MLCT band position increases in the same order, starting from 551 nm for [Fe(tpy)2]2+ to 576 nm for [Fe(Ttpy)2]2+ . Raman scattering (RS) spectra of tpy ligands were obtained upon non-resonance 780 nm excitation. Four excitation wavelengths (445, 532, 633 a 780 nm) were used for measurement Fe(II) complexes. The excitation profiles of both Raman scattering and surface-enhanced Raman scattering (SERS) spectra were constructed for [Fe(tpyCl)2]2+ complex. On the basis of DFT calculations performed for this complex, the Raman active modes have been assigned to the symmetry species of the D2d point group. Similarly as for the previously studied [Fe(tpy)2]2+ complex, activation of E modes in the region of MLCT band suggests contribution of Herzberg-Teller mechanism to the overall molecular...
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Crystal and molecular structure study of garnets from selected localities of the České středohoří Mts.
Píšová, Barbora ; Skála, Roman (advisor) ; Laufek, František (referee)
Major and minor element contents of garnets from mantle peridotites and eclogites brought to the surface by volcanic rocks of the České středohoří Mts. were determined by an electron probe microanalyzer. Garnets are homogenous and their chemical composition corresponds to solid solution containing 65-71 % pyrope, other end members significantly present are almandine, uvarovite and grosulare. This method also help to discover polyphase inclusions chemically corresponding to amphiboles (pargasite, cummingtonite, magnesio-hornblende and katophorite). Next to amphiboles following minerals were found in inclusions: omphacite, carbonates, phlogopite, clinochlore, olivine, apatite, spinel group minerals, and sulfidic phases potentially close to pentlandite. Samples were also analyzed by powder X-ray diffraction. Qualitative phase analysis confirmed pyrope homogeneity. The refinement of crystal structure parameters was performed by the Rietveld method. Raman microspectroscopy showed shifts of individual bands in the Raman spectra compared to those of pure pyrope. Position of bands in spectra differs due to the substitution of Ca for Mg at the dodecahedral sites of the structure. Mutual positive correlations among elements Cr, Ca, Mg, Al, Si, Mn, Ti and Na were observed. Correlations were found also between...
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Characterization of proteins of 2'-5' oligoadenylate pathway by means of vibrational spectroscopy
Víšová, Ivana ; Kopecký, Vladimír (advisor) ; Bednárová, Lucie (referee)
The work concerns to structural characterization of two important proteins of 2'-5' oligoadenylate pathway participating in an immune response of organism to a viral infection. Studied proteins were ankyrin domain of mouse RNase L, the C-terminal part of human phosphodiesterase 12 and the complete human phosphodiesterase 12. The proteins were characterized by Raman spectroscopy, infrared spectroscopy, electronic circular dichroism, dynamic light scattering and in addition by two non-spectroscopic methods- differential calorimetry and electrophoresis. For each protein the secondary structures, thermal stability, weight of oligomers and generally a basic characterization by above mentioned methods were provided.
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Analysis of organic additives in historical mortars
Křížová, Iva ; Čabala, Radomír (advisor) ; Hynek, Radovan (referee)
- 4 - Abstrakt The aim of this diploma thesis was to determine the possibility of identifying the protein and lipid additives, such as blood, gelatine, curd, lard and eggs, in the model samples of lime based mortars using Raman spectroscopy and gas chromatography- mass spectrometry. It was proved that the method of Raman spectroscopy can determine the presence of organic additives in the order of one weight percent. The gas chromatography enables to detect lipid additives from the order of hundredths weight percent. Unambiguous resolution of protein additives can be done in the samples with the concentrations up to the order of one weight percent of the additives.
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