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Application of imaging spectroscopy in monitoring of vegetation stress caused by soil pollutants in the Sokolov lignite basin
Mišurec, Jan ; Kupková, Lucie (advisor) ; Pavelka, Karel (referee) ; Homolová, Lucie (referee)
Forests can be considered as one of the most important Earth's ecosystems not only because of oxygen production and carbon sequestration via photosynthesis, but also as a source of many natural resources (such as wood) and as a habitat of many specific plants and animals. Monitoring of forest health status is thus crucial activity for keeping all production and ecosystem functions of forests. The main aim of the thesis is development of an alternative approach for forest health status based on airborne hyperspectral data (HyMap) analysis supported by field sampling. The proposed approach tries to use similar vegetation parameters which are used in case of the current methods of forest health status assessment based on field inspections. It is believed that importance of such new methods will significantly increase in the time when the planned satellite hyperspectral missions (e.g. EnMap) will move into operational phase. The developed forest health monitoring approach is practically demonstrated on mature Norway spruce (Picea abies L. Karst) forests of the Sokolov lignite basin which were affected by long-term coal mining and heavy industry and therefore high variability of forest health status was assumed in this case. Two leaf level radiative transfer models were used for simulating spectral...
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Use of laboratory and image spectroscopy to evaluate drought resistance of Scots pine and to distinguish its ecotypes
Raasch, Filip ; Kupková, Lucie (advisor) ; Potůčková, Markéta (referee)
The aim of this study was to propose a non-destructive method for measuring Pinus sylvestris seedlings, to determine whether water stress would be evident in laboratory spectra of pines, to compare whether the response of pines would differ by ecotype, and to investigate whether two ecotypes of Pinus sylvestris could be distinguished using laboratory and image spectroscopy. For these purposes, hyperspectral images of seed orchards from August 2020 were processed and a three-month laboratory experiment was conducted, in which stress from water deficit was induced in two-year-old pine seedlings from the upland and hilly ecotypes. Spectral data were analysed using mixed statistical models, analysis of variance, principal component analysis, training of supervised pixel classifiers, vegetation indices, and linear regression. Based on the analyses, it was found that water stress can be detected in severely stressed Pinus sylvestris seedlings. The most sensitive spectral bands to water content were observed in the region between 1000-2500 nm. The initial response to water stress did not differ by ecotype, but a faster recovery was observed at the upland ecotype after the period of draught. The two Pinus sylvestris ecotypes were distinguished with high accuracy from both laboratory and image spectral...
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Application of imaging spectroscopy in monitoring of vegetation stress caused by soil pollutants in the Sokolov lignite basin
Mišurec, Jan ; Kupková, Lucie (advisor) ; Pavelka, Karel (referee) ; Homolová, Lucie (referee)
Forests can be considered as one of the most important Earth's ecosystems not only because of oxygen production and carbon sequestration via photosynthesis, but also as a source of many natural resources (such as wood) and as a habitat of many specific plants and animals. Monitoring of forest health status is thus crucial activity for keeping all production and ecosystem functions of forests. The main aim of the thesis is development of an alternative approach for forest health status based on airborne hyperspectral data (HyMap) analysis supported by field sampling. The proposed approach tries to use similar vegetation parameters which are used in case of the current methods of forest health status assessment based on field inspections. It is believed that importance of such new methods will significantly increase in the time when the planned satellite hyperspectral missions (e.g. EnMap) will move into operational phase. The developed forest health monitoring approach is practically demonstrated on mature Norway spruce (Picea abies L. Karst) forests of the Sokolov lignite basin which were affected by long-term coal mining and heavy industry and therefore high variability of forest health status was assumed in this case. Two leaf level radiative transfer models were used for simulating spectral...
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Hyperspectral Remote Sensing for Environmental Mapping and Monitoring
Kopačková, Veronika ; Kolář, Jan (advisor) ; Chabrillat, Sabine (referee) ; Van den Meer, F. Devaraj (referee)
The main purpose of this thesis is to use Image Spectroscopy as a tool to monitor the environmental conditions in a region affected by anthropogenic activities via estimating both geochemical and biochemical parameters on a regional scale. The research has been carried on the Sokolov lignite mine, NW Bohemia, a region affected by long-term extensive mining. The thesis is divided into two thematic parts. First part is devoted to applications of Image Spectroscopy into Acid Mine Drainage mapping and its related issues (chapters 2 and 3). In chapter 2 the equivalent mineral end-members were successfully derived from the ASTER image data (Advanced Space-borne Thermal Emission and Reflection Radiometer satellite data). In the chapter 3 the pH was estimated on the basis of mineral and image spectroscopy. The Multi Range Spectral Feature Fitting (MRSFF) technique was utilized for mineral mapping and the multiple regression model using the fit images, the results of MRSFF, as inputs was constructed to estimate the surface pH and statistical significant accuracy was attained. In the second thematic part (chapters 4-6) Image Spectroscopy is applied into monitoring of vegetation stress. A new statistical method was developed to assess the physiological status of macroscopically undamaged foliage of Norway...
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Assessment of lignin content in needles of Norway Spruce (Picea abies L. Karst.) using laboratory and image spectroscopy
Suchá, Renáta ; Kupková, Lucie (advisor) ; Brodský, Lukáš (referee)
The master thesis deals with determination of selected biochemicals (lignin, carotenoids, water) content in Norway spruce needles using laboratory and imaging spectroscopy. The first part of thesis summarizes literature dealing with methods of estimating lignin and other biochemicals content. Three types of data are used in this thesis: 1. spectra measured by contact probe and ASD FieldSpec 4 Wide Res spectroradiometer, 2. spectra measured by integrating sphere and spectroradiometer and 3. aerial hyperspectral image data acquired by APEX sensor. The most useful transformation methods - first derivative and continuum removal are applied to the spectrum. Further the linear relationship between measured spectrum and content of biochemicals is analysed. Stepwise multiple linear regression is applied to select suitable wavelengths for modeling of biochemicals content in spruce needles. The model is also calculated and applied on the level of image hyperspectral data. Maps of lignin content in Norway spruce are the final output of these part of this. Next part of the thesis compares spectra measured by contact probe and spectra measured by integrating sphere. Diffrerence between the studied areas based on biochemicals content in spruce needles and several chemical elements in the soil and based on...
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