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Testing of new methods of animal tissue staining
Feitová, Věra ; Veselá, Mária (referee) ; Klusáková,, Jarmila (advisor)
For accurate diagnosis, detailed information about tissue structure and pathology is often needed. A biopsy is a diagnostic test, used to obtain tissue samples for further examination. The tissue undergoes fixation, cutting, dehydratation, paraffin embedding, slicing, rehydratation and staining. Silver may be used to mark recection borders, when the tissue sample is immersed in a 10% aquous solution of argent nitrate. After cutting, the silver is developed using a commonn black and white photographic developer. Another option is immersing the tissue sample into an aquous solution of ferric chloride and, after cutting, using an aquous solution of potassium ferrocyanide to produce ferric ferrocyanide, otherwise knows as Prussian blue.
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Image fusion within prostate biopsy
ŽŮČEK, David
This study deals with the use of image fusion within prostate biopsy, which is a method used for several decades, which serves to accurately capture pathological findings in the prostate, primarily prostate cancer. The combination of imaging modalities, which are magnetic resonance and intracavitary ultrasonography, is used to guide the biopsy. The aim of the study was to study the unusual situation where one and the same radiological team performs both procedures at the same time. Procedures from which the prostate biopsy methodology guided by image fusion is formed. Subsequently, we established a hypothesis that specific benefits can be found when the same doctor and radiology assistant perform both procedures. Procedures which consists of image fusion of magnetic resonance imaging and intracavitary ultrasonography, which guide the prostate biopsy of the same patient. The methodology of the theoretical part was the study of mostly foreign professional medical articles and literature and the subsequent use of the information to clarify the described method. In the practical part, the output data of physical examination of 59 patients were processed with the use of ROC analysis and then compared with two foreign studies to verify the established hypothesis. The data were provided by Mr. MUDr. Zdeněk Chudáček Ph.D. The results of the ROC analysis and its comparison with foreign studies confirmed the hypothesis, and therefore the presence of specific advantages of the studied unusual situation of performing a prostate biopsy in the way determined at the beginning of this study. The results of this study will be used in a broader journal publication, which aims to bring the issue of this study to the professional radiological public.
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Molecular genetic approaches used in preimplantation genetic analysis of human embryos in assisted reproduction
Limbergová, Jana ; Machoň, Ondřej (advisor) ; Šimoník, Ondřej (referee)
Preimplantation genetic testing is one of the main clinical procedures that take place in assisted reproduction centres around the world. It is sought after by couples for many different reasons. The causes of problems may relate to hereditary diseases that potential parents do not wish to pass on to their offspring, or may include the risk of transmission of chromosomal alterations. In addition, infertility may be caused by an increased risk of embryo aneuploidy, which correlates with mother's increased age and other factors that this bachelor thesis discusses. The bachelor thesis also focuses on up-to-date approaches to cytogenetic examinations for reproductive genetics and discusses recent clinical molecular methods that are used to improve the diagnosis and therapy of infertile couples. These are, for example, microarray methods, quantitative real-time PCR or next-generation sequencing and methods of whole-genome amplification. This work also summarizes methods that are gradually being abandoned, e.g. fluorescent in situ hybridization, and compares their advantages and disadvantages. Key words: preimplantation genetic testing, aneuploidy, structural rearrangements, monogenic diseases, biopsy, fluorescent in situ hybridization, microarray methods, comparative genomic hybridization, quantitative...
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Development of new molecular genetic aproaches in assisted reproductive technology
Limbergová, Jana ; Machoň, Ondřej (advisor) ; Šimoník, Ondřej (referee)
Preimplantation genetic testing is one of the major clinical procedures that takes place in centres of assisted reproduction all around the world. It is sought out by couples for many reasons discussed in this paper. The causes of couples' arrival to the centres might vary from inherited diseases that future parents do not wish to transfer to their offspring to the risk of transfer of chromosomal structural rearrangements. What's more, infertility might be caused by the greater risk of aneuploidy in embryos which correlates with higher maternal age and other factors. This paper also focuses on new approaches in cytogenetic examinations for reproductive medicine. Furthermore, it discusses clinical methods used to improve diagnosis and treatment of infertile couples and experimental methods that could become the base of new diagnostic tools. These are for example single nucleotide polymorphism methods, array-based methods, new generation sequencing and whole genome amplifications. It also looks back at methods that became old-fashioned, just like for example fluorescent in situ hybridisation, and states its pros and cons. Key words: preimplantation genetic testing, aneuploidy, structural rearrangements, monogenic diseases, biopsy
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Molecular analysis of head and neck carcinomas associated with HPV infection
Glendová, Kristýna ; Staněk, Libor (advisor) ; Tachezy, Ruth (referee)
Head and neck cancers (HNSCC) are highly heterogeneous disease, results from two major carcinogens - tobacco and/or alcohol, or HR HPV infection. This thesis was based on 60 biopsies of head and neck tumours embedded into paraffin after histological verification. HPV infection, including particular types was monitored in different HNSCC regions by multiplex qPCR. Subsequent IHC demonstrated expression of p16INK4A and p53 as a possible diagnostic biomarker. Based on the information, patients with HNSCC can benefit from antiEGFR therapy by Cetuximab, but so far without defined predictors, the analysis of point mutations of Ras gene family (Kras, Nras) and Braf gene was performed. These mutations were monitored as potential predictive biomarkers, in correlation with gender, age and other risk factors. For all statistical processing the Chi-x2 test was used. Key words: Head and neck cancers, biopsy, HPV types, PCR, p16INK4A, p53, molecular predictors, Kras, Nras, Braf
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Diagnosis and treatment of glomerulonephritis in children
Šejvlová, Barbora ; Nejmanová, Iveta (advisor) ; Kudláčková, Zděnka (referee)
Charles University in Prague, Faculty of Pharmacy in Hradec Králové Department of Biological and Medical Sciences Author: Barbora Šejvlová Leader: PharmDr. Iveta Nejmanová, Ph.D Form: Bachelor thesis Field of study: Medical Laboratory Technician Title: Diagnosis and treatment of glomerulonephritis in children Aim of the work: The aim of this theses is to present current examination methods for kidney disease and to describe in more detail the types of glomerulonephritis. A part of the work is also a case report of teenage girl who suffered from glomerulonephritis. Main findings: The thesis is divided into 5 parts. The first part contains information about the anatomy of the kidneys, the physiology of the kidneys and inflammatory diseases of the kidneys. The second part deals with all possible examination methods in nephrology. The chapter describes the examination of urine, which is further divided into the technique of sample acquisition, diuresis, techniques of sample examination, proteinuria and hematuria. In this chapter we will focus on ultrasonography, immunology and renal biopsy too. In the third part we will get acquainted with acute glomerulonephritis. We will discuss rapidly progressing glomerulonephritis in the fourth part. The last chapter is devoted to chronic glomerulonephritis....
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Correlation of morphokinetic parameters of human preimplantation embryos with their chromosomal status
Kosařová, Zuzana ; Jelínková, Ladislava (advisor) ; Knytl, Martin (referee)
A significant amount of human preimplantation embryos is aneuploid. Preimplantation genetic testing of aneuploidies (PGT-A) enables us to examine the number of chromosomes in a few trophectoderm cells biopsied from developing embryos, and only euploid embryos are then recommended to be transferred. Biopsy of trophectoderm cells is an invasive method, PGT is quite expensive, the examination is not performed at all patients. Therefore, non-invasive methods for determining the highest quality embryos are searching. Non- invasive continual monitoring in a time-lapse system is able to observe the morphokinetic parameters of embryonic development, and can select the best developing embryos with a good prognosis for successful implantation. However, there is still the question of whether and how morphokinetic parameters and embryonic ploidy correlate. Most studies on this topic show that a combination of both of these approaches is the best way for selecting the highest quality embryo for transfer.
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Molecular analysis of head and neck carcinomas associated with HPV infection
Glendová, Kristýna ; Staněk, Libor (advisor) ; Tachezy, Ruth (referee)
Head and neck cancers (HNSCC) are highly heterogeneous disease, results from two major carcinogens - tobacco and/or alcohol, or HR HPV infection. This thesis was based on 60 biopsies of head and neck tumours embedded into paraffin after histological verification. HPV infection, including particular types was monitored in different HNSCC regions by multiplex qPCR. Subsequent IHC demonstrated expression of p16INK4A and p53 as a possible diagnostic biomarker. Based on the information, patients with HNSCC can benefit from antiEGFR therapy by Cetuximab, but so far without defined predictors, the analysis of point mutations of Ras gene family (Kras, Nras) and Braf gene was performed. These mutations were monitored as potential predictive biomarkers, in correlation with gender, age and other risk factors. For all statistical processing the Chi-x2 test was used. Key words: Head and neck cancers, biopsy, HPV types, PCR, p16INK4A, p53, molecular predictors, Kras, Nras, Braf
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